Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02889 ATGACGATGAGGGCTGCAGCGGCAGCGGCGCCCCGCGGTTTCTGCCGGTTCTTCTGCACCAAGCCAACCGCGTCTTCTCCCACTGTCCGTGTCCCCCTCGCTTCTGGAGCCACTTCCGCTCTAAAGACGGCGGAGCCCAACGAAATTCTCTTCGTCACTGGTCTTAACAAACGTACTACATCAGAGACGCTGAGGGAAGCATTTAAAAAGTTCGGTGAAGTTAAACAGGCAAGGGTGGTAGCAGATCGTGTCTCAGGTTACTCTAAGGGATTTGGTTACGTGAAATATGCTACTTCAGAAGATGCTGCTAAGGGCATTCAAGGCATGGATGGCAAGTTTTTAGAAGGCTGGATTGTATTTGCAGAGTATGCAAGACCAAGAACCAATGCTATAGCCTCCCAGACACATCATACTGAACCATCCCACTCCAAACCTGAAGAAAAGAAAACGACACCAGAGAAGAATGATGAAATGAAGAAGGAAACTGCTGGCAAGAAGAAGAACAAGGAAAAGAAGATAACTGCAAAGGTAGTTGCAGACCAACCAATGGACAAAGATAAGGATAAGAAGTAA 573 0.4764 MTMRAAAAAAPRGFCRFFCTKPTASSPTVRVPLASGATSALKTAEPNEILFVTGLNKRTTSETLREAFKKFGEVKQARVVADRVSGYSKGFGYVKYATSEDAAKGIQGMDGKFLEGWIVFAEYARPRTNAIASQTHHTEPSHSKPEEKKTTPEKNDEMKKETAGKKKNKEKKITAKVVADQPMDKDKDKK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02889 190 Gene3D - 25 135 IPR012677 -
Mepo2g02889 190 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 48 126 IPR000504 GO:0003723
Mepo2g02889 190 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 116 IPR000504 GO:0003723
Mepo2g02889 190 SUPERFAMILY RNA-binding domain, RBD 45 130 IPR035979 GO:0003676
Mepo2g02889 190 MobiDBLite consensus disorder prediction 132 190 - -
Mepo2g02889 190 SMART rrm1_1 49 122 IPR000504 GO:0003723
Mepo2g02889 190 MobiDBLite consensus disorder prediction 139 190 - -
Mepo2g02889 190 PANTHER NUCLEOLAR PROTEIN 8 23 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02889 Mepo-Chr2 38640563 38643299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02889 52 127 Eukaryotic Initiation Factors Gene Family AT3G11400 36.842 3.59e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02889 - - mtr:25492943 307.375