Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02883 ATGTATAAGGAGAAAACCAAAAAGGTAGAAGCATTAAAGGGTAATATGCCAACAGTGTGGTTTTCTTTGAAGAAGTCACTACATTGCAAATCAGAACCATCAGATGTACATGATCCAAAAACAAGGAAACATTTAAGCACAATCTTAACAAAAAAAGGAGGAGGAGGAGGAGGAAGATCGGGTTGTTCAAGGTCAATAGCAAATCTAAAAGATGTTATTCATGGTAGCAAAAGACATATTGAAAAGCCACCAAGTTGCAGTCCAAGATCTATAGGAAGCAGTGAGTTTCTTAATCCAATAACTCATGAAGTTATTTTGAGTAACTCAAGGTGTGAGTTAAAAATCACTGGTTTTCAAGAAGGTATTAACAGTGGTGGTAACAATGCTAGTGGTGGTAGTAGTAGTGGTGGTTCTTCAACTTATGTTGGTACTTTAAGACCTGGTACACCTGGTCCTGGAGGACACCCTACAATGCATTACTTTAATCCTTCTTTTAGGACTTCTTCAACTCCTCCAAGGAAATCACCTTTTCTTTTGTCAGAAGGGTCTAATGGTTTTCATGGTGGTGGTGTTCATTCAAGTAATAGGATGTCTCTTGAGACAGATTCTAATGGTTCTTCAACTGTTACTTGTCACAAATGTGGTGAACAGTTTAACAAATGGGAAGCTGCTGAAGCTCACCATCTCTCCAAGCATGCTGTTACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAAATTATATGCAGGACAAGCTGGTTAAAGTCAGAAAACCACTGTGGCAGAATAGAGAGAGTTTTAAAGGTCCACAATATGCAAAAAACTTTAGCTAGATTTGAAGAATATAGAGAGATGGTGAAAATTAAAGCAAGCAAACTCCAGAAGAAACATCCTAGGTGTCTAGCTGATGGAAATGAACTTCTAAGGTTCTATGGAACCACAGTTGCTTGTTCTCTTGGTCTCAATGGCTCTTCAAGTCTTTGTTTATCAGAAAAATGTTGTGTTTGTAGAATCATTAGGAGTGGTTTTTCTGCTAAGAAAGAATTGAAAGGTGGCATAGGTGTTTTCACAACATCCACAAGTGGAAGAGCTTTTGAATCTATAGAGATTTTTGACAATGAACCTTCACTAAGAAAGGCATTGATAGTATGCAGAGTAATTGCTGGTAGGGTTCATAGGCCACTTGAGAACATTCAAGAAATGGCATCTCAAACTGGATTTGATTCATTGGCTGGTAAAGTAGGTCTTTATTCAAACATTGAGGAGCTTTATTTACTCAATCCAAGAGCTCTTCTACCTTGTTTTGTGGTAATTTGCAAATCATGA 1332 0.3769 MYKEKTKKVEALKGNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGGGRSGCSRSIANLKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGINSGGNNASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSNGFHGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRSGFSAKKELKGGIGVFTTSTSGRAFESIEIFDNEPSLRKALIVCRVIAGRVHRPLENIQEMASQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02883 443 ProSitePatterns Zinc finger C2H2 type domain signature. 211 232 IPR013087 -
Mepo2g02883 443 MobiDBLite consensus disorder prediction 123 145 - -
Mepo2g02883 443 MobiDBLite consensus disorder prediction 187 204 - -
Mepo2g02883 443 Gene3D - 224 443 - -
Mepo2g02883 443 SUPERFAMILY ADP-ribosylation 234 442 - -
Mepo2g02883 443 MobiDBLite consensus disorder prediction 123 157 - -
Mepo2g02883 443 FunFam C2H2-like zinc finger protein 233 442 - -
Mepo2g02883 443 MobiDBLite consensus disorder prediction 32 63 - -
Mepo2g02883 443 MobiDBLite consensus disorder prediction 185 204 - -
Mepo2g02883 443 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 19 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02883 Mepo-Chr2 38590642 38592988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02883 16 442 C2H2 Transcription Factor Family AT5G54630 69.697 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g02883 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02883 - - gmx:100787790 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02883 2 38590642 38592988 Mepo2g02883 2 38590642 38592988 ECH