Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02860 ATGGATTGGTCTCAAGGATGTGTCAGGGATGATGATCATCCATTGAACTGCACCGATGATGGATTTGTCTCATTGGCAAACTTGAAAGTTCCTGATACTACATATACTTTGGTGGATGAGAGTATTGGTCAAGAACAATGTAGAGGCAAATGCTTGAATAATTGTTCATGCATGGCTTATACAAATACAAATATTAGTGGAGCAGGAACTGGTTGTGTTATGTGGTTTGGTGATTTAATTGATATCAAACTGATTCCAGTTGGTGGACAAGTTCTACATATCCGGATGCCTGCTTCAGAATTAGTCATCAATAATACCGAGGATAAGCACAAGAAGAACTTGAGAAAAATAGTTTTAATTAGTGTTTCCGCGGCTTTGGGAATGCTTTTACTTGCTATTTACTTTTTCTACAGATTCTGGAGGTGCATTTCAAAGACAAAAGATACCTATGAAAAACTCATGGACGATCTGGATCTCCCATTGCTTAATCTGTCAACAATTATTACTGCCACTGACAACTTCTCGGAGAAGAACAAAATTGGAGAAGGTGGTTTTGGACCTGTATATTTGGGAAAATTAGGGAGTGGACTAGAAATTGCTGTGAAGAGACTTTCACAGAGCTCAAGACAAGGGATGAGAGAGTTCATAAATGAAGTAAAACTTATTGCAAATGTTCAGCACCGAAATCTTGTAAAGCTTATTGGTTGCTGCATTCAGAGAGAAGAAAAAATGCTAGTTTATGAATACATGGCTAATGGTAGTCTAGACTACTTCATTTTTGATCGTACCAAAAGTAAATTGCTAGATTGGCCAAAGCGTTTCCACATAATTTGCGGAATCGCTAAAGGGCTTATGTATCTTCATCAAGATTCTCGATTGAGGATTGTCCATAGAGATCTCAAAACAAGTAATGTTTTACTAGATGATACTTTGAATCCAAAAATATCAGATTTTGGAATGGCTAGAACTTTTGGAGGAAATCAAATTGAAGGAAACACAAATAGAATTGTTGGGACATAG 1020 0.3686 MDWSQGCVRDDDHPLNCTDDGFVSLANLKVPDTTYTLVDESIGQEQCRGKCLNNCSCMAYTNTNISGAGTGCVMWFGDLIDIKLIPVGGQVLHIRMPASELVINNTEDKHKKNLRKIVLISVSAALGMLLLAIYFFYRFWRCISKTKDTYEKLMDDLDLPLLNLSTIITATDNFSEKNKIGEGGFGPVYLGKLGSGLEIAVKRLSQSSRQGMREFINEVKLIANVQHRNLVKLIGCCIQREEKMLVYEYMANGSLDYFIFDRTKSKLLDWPKRFHIICGIAKGLMYLHQDSRLRIVHRDLKTSNVLLDDTLNPKISDFGMARTFGGNQIEGNTNRIVGT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02860 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Mepo2g02860 339 SUPERFAMILY Protein kinase-like (PK-like) 153 339 IPR011009 -
Mepo2g02860 339 Gene3D Transferase(Phosphotransferase) domain 1 250 339 - -
Mepo2g02860 339 Gene3D Phosphorylase Kinase; domain 1 140 249 - -
Mepo2g02860 339 SMART serkin_6 174 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g02860 339 SMART ntp_6 17 96 IPR003609 -
Mepo2g02860 339 ProSiteProfiles PAN/Apple domain profile. 17 98 IPR003609 -
Mepo2g02860 339 CDD PAN_AP_plant 13 97 - -
Mepo2g02860 339 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 250 339 - -
Mepo2g02860 339 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 140 249 - -
Mepo2g02860 339 Pfam Protein tyrosine and serine/threonine kinase 177 324 IPR001245 GO:0004672|GO:0006468
Mepo2g02860 339 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 339 - -
Mepo2g02860 339 ProSiteProfiles Protein kinase domain profile. 174 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g02860 339 Pfam PAN-like domain 17 82 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02860 Mepo-Chr2 38363133 38364574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02860 117 339 Receptor kinase-like Gene Family AT4G23190 52.000 6.17e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo2g02860 PK_Tyr_Ser-Thr 9.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02860 - - gmx:100808807 461.07