Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02859 ATGGGTGGGGCTTGTGGATATGGTAACCTTTACAGTCAAGGGTATGGAACAAACACTGCTGCTTTGAGTACAACACTTTTCAACAATGGCTTAAGCTGTGGCTCTTGCTATGAAATTAGGTGTGCTAATGACCATAGATGGTGCCTTCCTGGTTCCATTGTGGTTAGTGCCACCAATTTCTGTCCACCAAACAATGCTTTACCTAACAATCAAGGTGGTTGGTGTAACCCTCCTCTCCAACATTTTGATCTTGCTCAACCTGTTTTTCTTCGTATTGCTCAATATAAAGCTGGAATTGTTCCTGTAGATTTTAGAAGGGTGTCATGTAGGAGAAAGGGGGGTATAAGGTTCACTATCAATGGACATTCTTACTTTAACCTAGTTCTTATCACAAAGGTTGGTGGTGCTGGAGATGTACATGCTGCATCCATCAAAGGGTCAAAAACTGGTTGGATATCTATGTCAAGAAACTGGGGACAAAACTGGCAGAGCAACAATTATCTCAGTGGTCAAAGTTTGTCTTTTAAGGTTACAACTAGTGATGGTCGTACTGTTGTTTCCAATAATGTTGCTCCAGCTGGATGGTCTTTTGGTCAAACCTACACTGGTATGAAGTTGGGATGGGACCTTAAAAGAAATTTGAATAGGCGTCTCATAGCATGGAGGAGCGATGATGATCCAACCCCAGGAGACTTTTCTTGGGGTGTTGTATTGAATCCATATCCTGATATCTATATGATGAAGGGAGAAAAAAAGTACCACAGACTTGGACCATGGAACGGCTTGCGTTTTAGTGGAATGCCAGAGATGAAGCCTAATCCTGTTTTCAGTTACAATTTTGTCTGCAATAAAGAAGAGGTTTATTACTCATGGAACATCAATGCTAGTTCTCTAATATCAAAAGTGGTACTTAACGAAACCAGTTATGAACGTCCTCGCCACACATGGTCAAAAGACGACGAATTATGGATGCTTCATTCAAGAATGCCAGGAGACTATTGTGACCATTACAGTCTATGCGGAAACAATGGATACTGCAGCAGTACTAATTCACCAATATGTGAATGTTTTGAAAGGGTTCAAGCCTAA 1089 0.4114 MGGACGYGNLYSQGYGTNTAALSTTLFNNGLSCGSCYEIRCANDHRWCLPGSIVVSATNFCPPNNALPNNQGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVDFRRVSCRRKGGIRFTINGHSYFNLVLITKVGGAGDVHAASIKGSKTGWISMSRNWGQNWQSNNYLSGQSLSFKVTTSDGRTVVSNNVAPAGWSFGQTYTGMKLGWDLKRNLNRRLIAWRSDDDPTPGDFSWGVVLNPYPDIYMMKGEKKYHRLGPWNGLRFSGMPEMKPNPVFSYNFVCNKEEVYYSWNINASSLISKVVLNETSYERPRHTWSKDDELWMLHSRMPGDYCDHYSLCGNNGYCSSTNSPICECFERVQA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02859 362 Pfam S-locus glycoprotein domain 255 358 IPR000858 GO:0048544
Mepo2g02859 362 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 2 114 IPR007112 -
Mepo2g02859 362 PRINTS Expansin signature 72 89 IPR002963 GO:0009664
Mepo2g02859 362 PRINTS Expansin signature 160 181 IPR002963 GO:0009664
Mepo2g02859 362 PRINTS Expansin signature 53 63 IPR002963 GO:0009664
Mepo2g02859 362 PRINTS Expansin signature 189 205 IPR002963 GO:0009664
Mepo2g02859 362 PRINTS Expansin signature 41 52 IPR002963 GO:0009664
Mepo2g02859 362 PRINTS Expansin signature 113 125 IPR002963 GO:0009664
Mepo2g02859 362 PRINTS Expansin signature 14 28 IPR002963 GO:0009664
Mepo2g02859 362 PRINTS Expansin signature 89 102 IPR002963 GO:0009664
Mepo2g02859 362 PRINTS Expansin signature 125 146 IPR002963 GO:0009664
Mepo2g02859 362 SUPERFAMILY Barwin-like endoglucanases 1 131 IPR036908 -
Mepo2g02859 362 SUPERFAMILY PHL pollen allergen 111 203 IPR036749 -
Mepo2g02859 362 SMART dpbb_1 19 104 IPR007112 -
Mepo2g02859 362 PANTHER EXPANSIN-A15 1 203 IPR002963 GO:0009664
Mepo2g02859 362 FunFam Expansin 114 206 - -
Mepo2g02859 362 Pfam Expansin C-terminal domain 115 192 IPR007117 -
Mepo2g02859 362 Gene3D - 114 206 IPR036749 -
Mepo2g02859 362 CDD DPBB_EXPA_N 1 109 - -
Mepo2g02859 362 PRINTS Expansin/Lol pI family signature 23 41 IPR007118 GO:0005576
Mepo2g02859 362 PRINTS Expansin/Lol pI family signature 1 19 IPR007118 GO:0005576
Mepo2g02859 362 PRINTS Expansin/Lol pI family signature 189 203 IPR007118 GO:0005576
Mepo2g02859 362 PRINTS Expansin/Lol pI family signature 151 165 IPR007118 GO:0005576
Mepo2g02859 362 PRINTS Expansin/Lol pI family signature 97 113 IPR007118 GO:0005576
Mepo2g02859 362 Gene3D - 1 110 IPR036908 -
Mepo2g02859 362 Pfam Lytic transglycolase 19 103 IPR009009 -
Mepo2g02859 362 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 124 203 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02859 Mepo-Chr2 38360664 38363110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02859 1 206 Expansin Gene Family AT2G03090 80.097 4.67e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02859 - - gmx:100776066 412.92