Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02841 ATGGAACCAAGTTTTGATTATCTTTCAAACCTTCTTTGCACGGAGGAAGATAGCAGTGTTTTTGATGATGCTGAATATGGTGGATCGACGGAGGTATACGAGGATTCGTGGCATCGTAGGAACCAACAACGCTCTGGTGGTATTCCTAATGAGTTGCACATGCCATTGCAGAGTGAAGAGTGTTTGGTTCTGATGTTGGAAAAAGAACGTCAACAATGGCATGGTGCTGATTACTTGAATAGGTTGAAGTTTGGAGATTTGGATTTTGGTGCAAGAAATGAAGCCATTGATTGGATTCAAAAGGTTCAAGCACATTTCGGTTTTGGTCCTCTTTGTGTTTACCTATCCATAAATTACATGGATCGTTTCCTTTCGGCATATCAATTCCCAAAGAGAAGAGATTGGTCAATGCAATTGTTGGCTGTTGCTTGCTTATCTTTGGCAGCCAAAGTAGACGAAACTGATGTTCCTCAGATTCTTGACTTGCAGATTGGTGAACCCAAGTTTGTGTTTGAAGCAAAAACCATTCAGAAAATAGAGCTTTTAGTACTAAGCACATTGAAGTGGAGAATGCAAGCAATTACTCCTTTCTCCTTCATTGAATATTTCCTTTCTATGATTAATGATGATAAGAGTTCATTGAATTCTTTAATTTCACAATCTACTCAACTTATATCAAGCACCATTAAAAGTCCCGACTTCTTGGAATTCAAACCTTCCGAGATTGCAGCAGCAGTGGCAACACATGTTGTAGGGGAATTCCAAGCAATTGATAGTAGCAAATCAATTTCTACTCTGATTCAATACATAGAAAAGGAGAGATTGTTGAAGTGTGTTGAAAAGGTCCAAGAGATGTGTGTTTTCACTTCCAAGGACTCAAATGCCTCTTCTGTCTCTAGTGTGCTTCAAAGCCCAATGGGTGTGTTTGATACATTGTGCTTCCGCTACAAATGTGATGACAACAATGCTGGTGTTGGTTCATATTCTTCTTCATATAGTAGTAGCACAGATGCTAAGAGGAGGAAGTTAAACAAAAGATGTGGATTAGAGCTTTTGTAG 1059 0.3909 MEPSFDYLSNLLCTEEDSSVFDDAEYGGSTEVYEDSWHRRNQQRSGGIPNELHMPLQSEECLVLMLEKERQQWHGADYLNRLKFGDLDFGARNEAIDWIQKVQAHFGFGPLCVYLSINYMDRFLSAYQFPKRRDWSMQLLAVACLSLAAKVDETDVPQILDLQIGEPKFVFEAKTIQKIELLVLSTLKWRMQAITPFSFIEYFLSMINDDKSSLNSLISQSTQLISSTIKSPDFLEFKPSEIAAAVATHVVGEFQAIDSSKSISTLIQYIEKERLLKCVEKVQEMCVFTSKDSNASSVSSVLQSPMGVFDTLCFRYKCDDNNAGVGSYSSSYSSSTDAKRRKLNKRCGLELL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02841 352 Gene3D - 65 281 - -
Mepo2g02841 352 FunFam D2/4-type cyclin 75 187 - -
Mepo2g02841 352 Gene3D - 75 192 - -
Mepo2g02841 352 SUPERFAMILY Cyclin-like 50 191 IPR036915 -
Mepo2g02841 352 FunFam D6-type cyclin 188 280 - -
Mepo2g02841 352 CDD CYCLIN_AtCycD-like_rpt1 91 189 - -
Mepo2g02841 352 CDD CYCLIN_AtCycD-like_rpt2 194 282 - -
Mepo2g02841 352 Pfam Cyclin, C-terminal domain 194 292 IPR004367 -
Mepo2g02841 352 SMART Cyclin_C_2 194 304 IPR004367 -
Mepo2g02841 352 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Mepo2g02841 352 SMART cyclin_7 97 185 IPR013763 -
Mepo2g02841 352 Pfam Cyclin, N-terminal domain 64 191 IPR006671 -
Mepo2g02841 352 SUPERFAMILY Cyclin-like 177 289 IPR036915 -
Mepo2g02841 352 PANTHER CYCLINS 58 290 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02841 Mepo-Chr2 38135592 38136650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02841 65 320 Core Cell Cycle Gene Families AT2G22490 47.170 6.35e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02841 K18810 - gmx:100803873 409.453