Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02792 ATGGAAATGGAAGGTTTTGATTGGGGTTATGATATATTTGGAGATGCTAGTGAGAGAATTGGTAAAGATGGTTTTGAAGTAAACAATGAGGTAATTGGAAGTGGGAATGGTTCAACTTTCTCTTTGGTTTTGGATAGGGAGAGAGGGGAGCTTGTAGAGGCACCTGTTAAAATGGAAGGCAAGGGTGTGTCCACTACTGAGAGAAGTGTTGAAGCTTTGAAGAATCATAGTGAGGCAGAAAGGAGGAGAAGAGCTAGGATTAATGCACATCTTGATACACTTCGTTGTGTCATTCCAGGTGCTATGAAGATGGACAAAGCATCATTACTTGGTGAAGTTATTACACATTTGAAAGAGCTAAAAAGGAATGAAGCACAAGCATGTGAAGGTTTAATGATACCAAAGGACAATGATGAAATAAGTGTTGAAGAACAAGAGGGAGGTTGGAATGGTTTTCCTTTTTCAATTAAAGCATCACTATGTTGTGAATATCAACCAGGTTTATTGTCTAATATAAGACAAGCACTAGATGCTCTTCATCTCATCATCATGAAAGCAGATATTGCAACTTTTGGAGGCAGAATGAAGAATGTCTTTGTTGTAATTAGCTGTGAAGAACAAAACTTTGATGCTGCTGAATACAGACAGTTTCTTGCTGGTTCTGTTCACCAAGCTCTTAAGTCTGTACTTGGTAGATTTTCTGTTTCACAGGATATGCTAAGAGCAAGAAAAAGAAGGAGGGTTTCTATATTCAGTTCTTCATCTTTAGAAGATTTCTTATAA 783 0.3755 MEMEGFDWGYDIFGDASERIGKDGFEVNNEVIGSGNGSTFSLVLDRERGELVEAPVKMEGKGVSTTERSVEALKNHSEAERRRRARINAHLDTLRCVIPGAMKMDKASLLGEVITHLKELKRNEAQACEGLMIPKDNDEISVEEQEGGWNGFPFSIKASLCCEYQPGLLSNIRQALDALHLIIMKADIATFGGRMKNVFVVISCEEQNFDAAEYRQFLAGSVHQALKSVLGRFSVSQDMLRARKRRRVSIFSSSSLEDFL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02792 260 PANTHER TRANSCRIPTION FACTOR BHLH30 53 252 IPR045847 GO:0003700|GO:0006355
Mepo2g02792 260 Gene3D - 66 127 IPR036638 GO:0046983
Mepo2g02792 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 123 IPR036638 GO:0046983
Mepo2g02792 260 CDD ACT_UUR-ACR-like 159 201 - -
Mepo2g02792 260 SMART finulus 77 126 IPR011598 GO:0046983
Mepo2g02792 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Mepo2g02792 260 Pfam Helix-loop-helix DNA-binding domain 75 120 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02792 Mepo-Chr2 37666673 37668883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02792 4 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 37.452 2.43e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g02792 HLH 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02792 - - gmx:100788819 394.43