Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02782 ATGAGGAGTACTGGAGGAGGAGAGATAGTTCAAGTAGAAGGAGGACACATAGTTCGAGCCACCGGTAGAAAAGATCGTCACAGCAAGGTTTACACATCAAAAGGTCCTCGCGATCGCAGGGTTCGTCTCTCAGCACACACAGCCATCGAATTCTATGATGTTCAAGATCGCCTTGGCTACGACAGACCAAGCAAAGCAGTGGATTGGCTCATCAAGAAAGCAAAGTCTTCCATTGACAAGCTCGCGGAGCTTCCTCCATGGCATCCAATCGGCGAAAATCAAACTCTAAAACCTCAAGGTGAAGAGCAGAATCTAGCTGCAAACTCAGGTGGAATGGTTATTGGAGAAACATCAGAATCTAATGGTTACAATTTTCATTTTTTAAGACAATTGAGTGAGAATCAAGGTAACCATAATTCAACTTTCATTTCACCACATAATATTGAAACTGATCCTATACCTTTCTTTCCAACTACCTCTTCTACTTCTTCATCCATCAATTTTCAAAACTACCCTTCTGAAAACCTTGGCCTCTCTCTTCATTCCTTCCAAGATAACAATGGTTTCATTCCATGGCAATCACAACAAGTATGTGAAAACCATGAAACTTCAAATGAAAACCAAAACCAAAACCAAAACCAAACCTTTTTTGAGAACCAATATCATAGAATTGAGAATTGGAACAATGAAACAACCAATGATTATATAAAAAAAGTTGGATTCATGGTAAACTCACACCCATTTCTAGGCCAAGGTTCAGGTTCAGAATACTCTCCAAATGAGGCCCTTCAGTCGAATTTTTCGCATTCTGTTAGAACATGGAATGAGATTCCTATGGATTCTTCTTCAGAGGTTCATCATCACAGGTCTCAACAAGTTCATCAAGCTTCAATCTTTGGAAGCAGGTTTGTTTCTGATGGATTAGCAGGTTTCTGCATTCCTGATACAATTCAAGGTGGAGAAGAGGGTCATAGAGTTTCTTCTAATAGACCTTCTTCTTCTCCTAACCACAACTGA 1017 0.4002 MRSTGGGEIVQVEGGHIVRATGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELPPWHPIGENQTLKPQGEEQNLAANSGGMVIGETSESNGYNFHFLRQLSENQGNHNSTFISPHNIETDPIPFFPTTSSTSSSINFQNYPSENLGLSLHSFQDNNGFIPWQSQQVCENHETSNENQNQNQNQTFFENQYHRIENWNNETTNDYIKKVGFMVNSHPFLGQGSGSEYSPNEALQSNFSHSVRTWNEIPMDSSSEVHHHRSQQVHQASIFGSRFVSDGLAGFCIPDTIQGGEEGHRVSSNRPSSSPNHN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02782 338 ProSiteProfiles TCP domain profile. 23 81 IPR017887 -
Mepo2g02782 338 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 301 IPR005333 GO:0003700
Mepo2g02782 338 MobiDBLite consensus disorder prediction 315 338 - -
Mepo2g02782 338 MobiDBLite consensus disorder prediction 322 338 - -
Mepo2g02782 338 Pfam TCP family transcription factor 22 230 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02782 Mepo-Chr2 37564145 37565262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02782 5 334 TCP Transcription Factor Family AT1G53230 36.856 3.17e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo2g02782 TCP 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02782 - - pvu:PHAVU_005G097200g 340.117