Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02774 ATGACTCAGATGATGAGCCTCAGGATGCAGAGAAATATTATTAGTAATAATAACGGGGTGCATCAAGCATGTGCAGCATGCAAGCATCAAAGGAAAAAATGCAGTGAAAATTGCATATTAGCACCATACTTTCCATCAAGCAGAAGTAGAGAATTCAAAGCAGTGCACAAAGTGTTTGGTGTTAGCAACATAACAAAGTTTGTAAGGAATGCTCAAGAGGGAGATAGAAGAAAAGTTGTGGATTCATTGATATGGGAAGCACTCTCTAGGCAAAGGGATCCAATAAATGGTTCTTATGGAGAGTATACAAAAGTTTACAATGAGTATAAAAGAGTATTTGATGAACTTAAGATGTTTAGAGATCACCAAAACCAATTGGTGCAAGTGCCACCTCAAGGGAAAGTTAGAGCAGAAACACCTGATCATAATGCAGTAGATTATCATCATCTTCATCATGGGAATCATAAGAATGGTATTATTGATTCTACTACCATTTATAATACATATTGCTCAAATTATCTACAAGATCTTGATAGTTTGAGGACAGAAGTTGTCATCCCAAATATTCAGCAGCAGTCACAGTCATACTATATTGCAGGTGAGGAATTCAACCAGTGA 618 0.3657 MTQMMSLRMQRNIISNNNGVHQACAACKHQRKKCSENCILAPYFPSSRSREFKAVHKVFGVSNITKFVRNAQEGDRRKVVDSLIWEALSRQRDPINGSYGEYTKVYNEYKRVFDELKMFRDHQNQLVQVPPQGKVRAETPDHNAVDYHHLHHGNHKNGIIDSTTIYNTYCSNYLQDLDSLRTEVVIPNIQQQSQSYYIAGEEFNQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02774 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 22 136 - -
Mepo2g02774 205 Pfam Lateral organ boundaries (LOB) domain 23 118 IPR004883 -
Mepo2g02774 205 ProSiteProfiles LOB domain profile. 22 123 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02774 Mepo-Chr2 37512789 37515524 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02774 21 121 AS2 family AT1G06280 59.406 3.53e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo2g02774 LOB 2.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02774 - - mtr:112420889 391.349