Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02768 ATGGGGGGTTTTCCACTAGGTACAAAGAAGAAGAAAAACAACAAAAATCAACACGGTTTCGAAACCCTAGGTCTAAACCGCGATGTATTCAGTGGAATCAAACGCAAAGGTTACAAAGTTCCCACTCCAATTCAGCGAAAAACGATGCCACTCATTCTCTCCGGCATCGACGTCGTTGCTATGGCTCGTACCGGTTCCGGTAAAACGGCAGCGTTTCTTGTTCCGATGCTTCACCGACTTAATCAGCATCTTCCTCAGGGTGGCGTTAGAGGACTTATTTTGTCACCGACTAGAGATTTAGCGCAACAGACATTGAAGTTCACCAAAGAGCTTGGTCACTTCACAGACCTTCGTGTCAGTTTGTTAGTTGGCGGTGATAGTATGGAAAGTCAGTTTGAGGAGTTAGCTCAGAATCCAGATATTATAATTGCCACTCCCGGTAGGCTCATGCACCATTTGTCTGAGGTTGATGACATGTCCTTGCGTAAGGTGGAGTATGTTGTTTTTGACGAGGCGGATTGTTTATTTGGTATGGGTTTTGCTGAGCAGCTCCATCAAATTCTTGCCCAGCTTGGTGAGAACCGTCAAACCTTGCTTTTCAGTGCCACATTACCCAGCGCTCTTGCAGAATTTGCTAAGGCTGGTCTGCGAGACCCTCGTCTTGTTCGCCTTGATTTGGAAACTAAAATCAGCCCTGACTTGAAGCTTGTCTTTTTCACTTTGAGGCAGGAAGAGAAATATGCTGCTTTGCTCTATTTAATTAGGGAACTTATTGGTTCTGATGAGCAGACTTTAATTTTTGTATCCACTAAACATCATGTTGAGTTTCTCAACTCGTTGTTTCAACTAGAGGGTATTAGGCCTTCTGTATGTTATGGAGACATGGATCAAGACGCTCGCAAAGAACATGTGGCCAGGTTTAGGTCTAGAAAGACAATGTTGTTGATTGTCACCGACATTGCTGCTCGGGGAATTGACATTCCATTGCTTGATAATGTTATCAATTGGGACTTTCCTCCTAAGCCTAAAATATTTGTTCATCGAGTTGGGCGGGTTGCAAGGGCTGGTCGTACTGGTACCGCATATTCTTTCTTGACTGCTGAGGATATGGCTTATCTCTTGGATCTTCATTTGTTTCTTTCAAAACCAGTCAAAGCTGCTCCAACTGAGGAAGAAGTCTTGCGGGATATGGATGGAGTGATGTCCAGAATTGACGACGCAATGTTAAATGGAGAAACCGTTTATGGTCGTTTCCCTCAAAAAGTCATTGACCTTGTTTCTGACAGAGTTAGGGAAGTTATTGATACTTCTGCGGAGCTGGAAGCATTGCAGAGAGCCTGTAAAAATGCATTTCGTTTATACTCTAAAACAAAACCCTTACCCTCAAAGGAGTCCATTAGAAGAGTAAAGGATTTGCCACATGAAGGTCTGCATCCGATTTTCAACAAAGTGTTGGGAACAGGGGAGTTAACGGCAATTGCGTTTTCTGAGCATTTGAAAAATTTTAGGCCAAAGCAGACCATTTTGGAAGCGGAAGGAGAAGCAGCTAAAGCTAAACGTAGAGCAGGCCCTTCTGGTCAATGGGTTGATGTGATGAAAAGGAAAAGAGCCGTTCATGATAGTATTATAGTTAATGAACAGCATTCGAAGAGTAATGAACACCAATCGAAGAGTAATAGTGAAAAGGAGGAAAATCAACCGGAAATTACTCCTTCCATGGATAAAGGGAGAAAAGCAGCACGTGGCTCTAAGCGAAAGCCAAATCCAGAAAGTTTCAAGGACGAGGAATACTTTATAAGTTCCATACCTCAAAATCAACACATGGAGGCAGGCCTTGCGGTAAAAGCTAATGAAGGCTTTTCTTCAAACAGATTGGATGATGCTGTCCTAGATCTAGGTGCAGACGATGGTGCTGGCATTAAGAAACAAAAATCTGTATATCACTGGGATAAGAGGAGTAAAAAGTACATCAAGTTAAACAACGGTGACCGTGTTGCTGCAAATGGAAAGATAAAGACAGAGAGTGGAGCAAAAACAAAGGCCAACAAGACTGGTATATATAAAAAGTGGAAGGAACGCTCGCACTCCAAGATATCTCTTAAGGGGACAAGTGGTGATGGTGATGCTCAGGAATCATCAAGTTCAAGAGGATCTTACCGAGGAGGTGGTGGTAGGAATTACAAAGGCGGCAAGAAGCAGCATTCAATGCCCAATGCTCATGTCCGTTCAGAAATCAAAGATATGGATCAAATTCGAAAGGAGAGGCAGAAGAAAGCCAGCAAAATTTCTTATATGAAGAGCAAGTCGCCAAAGGGTAAAAAATCTGGCAAACCTGGAAGAAAGGGAGGAAATAAAAGAAAATCTAAGTAG 2370 0.4291 MGGFPLGTKKKKNNKNQHGFETLGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLHRLNQHLPQGGVRGLILSPTRDLAQQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQTLLFSATLPSALAEFAKAGLRDPRLVRLDLETKISPDLKLVFFTLRQEEKYAALLYLIRELIGSDEQTLIFVSTKHHVEFLNSLFQLEGIRPSVCYGDMDQDARKEHVARFRSRKTMLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTAEDMAYLLDLHLFLSKPVKAAPTEEEVLRDMDGVMSRIDDAMLNGETVYGRFPQKVIDLVSDRVREVIDTSAELEALQRACKNAFRLYSKTKPLPSKESIRRVKDLPHEGLHPIFNKVLGTGELTAIAFSEHLKNFRPKQTILEAEGEAAKAKRRAGPSGQWVDVMKRKRAVHDSIIVNEQHSKSNEHQSKSNSEKEENQPEITPSMDKGRKAARGSKRKPNPESFKDEEYFISSIPQNQHMEAGLAVKANEGFSSNRLDDAVLDLGADDGAGIKKQKSVYHWDKRSKKYIKLNNGDRVAANGKIKTESGAKTKANKTGIYKKWKERSHSKISLKGTSGDGDAQESSSSRGSYRGGGGRNYKGGKKQHSMPNAHVRSEIKDMDQIRKERQKKASKISYMKSKSPKGKKSGKPGRKGGNKRKSK 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02768 789 SMART DBP10CT_2 631 693 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Mepo2g02768 789 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 10 696 - -
Mepo2g02768 789 MobiDBLite consensus disorder prediction 542 594 - -
Mepo2g02768 789 MobiDBLite consensus disorder prediction 685 699 - -
Mepo2g02768 789 SMART ultradead3 37 237 IPR014001 -
Mepo2g02768 789 MobiDBLite consensus disorder prediction 762 789 - -
Mepo2g02768 789 SMART helicmild6 271 356 IPR001650 -
Mepo2g02768 789 CDD SF2_C_DEAD 244 365 - -
Mepo2g02768 789 MobiDBLite consensus disorder prediction 671 789 - -
Mepo2g02768 789 Pfam DBP10CT (NUC160) domain 631 692 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Mepo2g02768 789 MobiDBLite consensus disorder prediction 700 720 - -
Mepo2g02768 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 374 IPR027417 -
Mepo2g02768 789 CDD DEADc_DDX54 19 223 IPR033517 -
Mepo2g02768 789 Pfam Helicase conserved C-terminal domain 246 356 IPR001650 -
Mepo2g02768 789 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 18 46 IPR014014 GO:0003724
Mepo2g02768 789 MobiDBLite consensus disorder prediction 542 593 - -
Mepo2g02768 789 Pfam DEAD/DEAH box helicase 42 209 IPR011545 GO:0003676|GO:0005524
Mepo2g02768 789 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 49 222 IPR014001 -
Mepo2g02768 789 Gene3D - 4 225 IPR027417 -
Mepo2g02768 789 MobiDBLite consensus disorder prediction 737 761 - -
Mepo2g02768 789 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 246 395 IPR001650 -
Mepo2g02768 789 Gene3D - 235 459 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02768 Mepo-Chr2 37458232 37467389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02768 20 389 Eukaryotic Initiation Factors Gene Family AT1G72730 32.708 3.56e-56 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02768 K14808 - gmx:100806274 1226.85