Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02756 ATGCTAAAAAATATGGATGAAGTAGAAATCACAAATGTTAATTTCCCTCAAACAACTAGTGCTTCTAATAATCCTCCTGCTTTGAAGAGAAAAAGAAACCTTCCGGGAAATCCAGATCCTGAAGCAGAAGTTATAGCTTTATCACCAAAGACACTCATGGCTACAAACAGATTCTTGTGTGAAACATGTGGGAAAGGTTTTCAAAGAGATCAAAATCTACAGCTACATAGACGTGGACATAATCTTCCATGGAAGCTTAAGCAGAGAACAAATAAAGAAATGAAGAAGAGAGTTTATGTGTGTCCAGAGAAGACTTGTGTCCACCATGATCCTTCAAGAGCACTTGGTGACTTAACTGGGATAAAAAAGCACTTTTGTAGAAAGCATGGTGAAAAGAAGTGGAAGTGTGAGAAGTGCTCAAAACGTTATGCCGTTCAGTCAGATTGGAAAGCTCACTCAAAAACATGTGGTACTAGAGAATACAAATGTGACTGTGGAACTATCTTTTCAAGGAGAGACAGCTTCATAACTCACAGAGCCTTTTGTGATGCCTTAGCAGAAGAAACAGCAAGGGTAAGTGCAGCATCAGAAATAAACAACAGCTCATTATTAAGGGGTAACATTAGTAATTACACCAACATAATGGGAACAACATCTCTAGTCCCTAACAATAACATGCCAACCCATTTTCCTTCAATTTTCAAACCAATTTCAACTCCTGATCATCATCATCATCATGAAACAACCAATCAAACTAGAGGACTATCCCTTTGGATGAATCAAACATCTCATTCTCAACCTCATGAAACAATGATAACCACCACCAATGGAAATTCTAGTTTGCATGAGATTCATCAACAACTTGACTCATCATCAAGAGAAATTATGTATGGTGGAAATGAAAACCCTTCACCATATTCTAATAATTATCAGCTAAATTGGGTTTTTGGAACTAAACTTGCAACCAATTGCAGCCAAGAATTAATTACTAGTACTACAACATCACTTCCACTAGGAAATATTAATGTTAATGTTAAGGATGTTTCTCATGATGCTACAAGCCAACAAATTTCTTCCTTGTACAGCTCACAACACCAAATATCTCATCAAAATCAAACATCTTCAGCAAACATGTCAGCTACAGCTTTGTTACAAAAAGCTGCTCAAATTGGATCAACTTCAACTGATACATCATTCCTTGGAAGCTTAGGTTTGAAATGCAGTAATAATAATAGTTCCAATGATGTGAACAAGTTTGGTGGTACTAGTATGTATGGTACTCCTAGTTCATTAATCATTAGTCTTGGCAATGAGGAAGATCATAATAATGCATGTGATTTTTCACAAATGCACCCATCTAAACGTAGACATGTGCAAGGTGAAGAGAATGGAGGAGGAGGGCAAACTAGGGATTTTCTTGGTGTTGGTGTGCAAACCATTTGTCACCCTTCATCAATCAACGGTTGGATTTGA 1473 0.3707 MLKNMDEVEITNVNFPQTTSASNNPPALKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEMKKRVYVCPEKTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVSAASEINNSSLLRGNISNYTNIMGTTSLVPNNNMPTHFPSIFKPISTPDHHHHHETTNQTRGLSLWMNQTSHSQPHETMITTTNGNSSLHEIHQQLDSSSREIMYGGNENPSPYSNNYQLNWVFGTKLATNCSQELITSTTTSLPLGNINVNVKDVSHDATSQQISSLYSSQHQISHQNQTSSANMSATALLQKAAQIGSTSTDTSFLGSLGLKCSNNNSSNDVNKFGGTSMYGTPSSLIISLGNEEDHNNACDFSQMHPSKRRHVQGEENGGGGQTRDFLGVGVQTICHPSSINGWI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02756 490 MobiDBLite consensus disorder prediction 10 27 - -
Mepo2g02756 490 Gene3D Classic Zinc Finger 127 194 - -
Mepo2g02756 490 Gene3D Classic Zinc Finger 37 110 - -
Mepo2g02756 490 FunFam protein indeterminate-domain 12-like 37 105 - -
Mepo2g02756 490 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Mepo2g02756 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 80 IPR013087 -
Mepo2g02756 490 FunFam protein indeterminate-domain 5, chloroplastic-like 112 191 - -
Mepo2g02756 490 SUPERFAMILY beta-beta-alpha zinc fingers 57 154 IPR036236 -
Mepo2g02756 490 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 18 478 IPR031140 -
Mepo2g02756 490 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02756 Mepo-Chr2 37340490 37343250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02756 24 490 IDZ Gene Family AT1G03840 53.333 6.37e-155 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g02756 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02756 K25870 - gmx:100790620 617.076