Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02755 ATGGATAATCAACAAGGTGTGGATCATGTAGACACTTTATTGATATACAAGGTGGTTCATGAGATGTTGTGGAAGATTCTCTCATATGCCACACGTGGTTCAGATACAAGCCATGCCCTCCAAGAATTAGACAAGTGTTTCGTCCTTTTCTTCGATGAAAATTTACGGTTTAGGGGAAGTGGAATTAATGACTTGCCTGGATTGCCTGCTGGAATGAAGTTTGTTCCAACAGATCAAGAGGTTCTTGAACTTTTGGAAGCAAAGGTGAGGTCTGATATTCATAATCTTCACCCTCTAATTGACGAGTTCATCCCTACTCTTGAAGGAGAGAATGGAATCTGCTACACTCATCCAGAGAAATTGGTAGCAGTAAGCAAAGATGGACTGATCCGCCATTTCTTTCACCGACCATCCAAGGCATACACAACAGGAACAAGAAAAAGAAGAAAGGAACATTCAGATCACAAGGATGGAAGCGAAACCTGTTGGCACAAAACAGATCCCGGCAAAGACTAA 516 0.4186 MDNQQGVDHVDTLLIYKVVHEMLWKILSYATRGSDTSHALQELDKCFVLFFDENLRFRGSGINDLPGLPAGMKFVPTDQEVLELLEAKVRSDIHNLHPLIDEFIPTLEGENGICYTHPEKLVAVSKDGLIRHFFHRPSKAYTTGTRKRRKEHSDHKDGSETCWHKTDPGKD 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02755 171 Gene3D NAC domain 77 171 IPR036093 GO:0003677|GO:0006355
Mepo2g02755 171 ProSiteProfiles NAC domain profile. 68 171 IPR003441 GO:0003677|GO:0006355
Mepo2g02755 171 SUPERFAMILY NAC domain 63 170 IPR036093 GO:0003677|GO:0006355
Mepo2g02755 171 MobiDBLite consensus disorder prediction 147 171 - -
Mepo2g02755 171 Pfam No apical meristem (NAM) protein 69 168 IPR003441 GO:0003677|GO:0006355
Mepo2g02755 171 MobiDBLite consensus disorder prediction 141 171 - -
Mepo2g02755 171 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 61 167 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02755 Mepo-Chr2 37314757 37324869 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02755 54 166 NAC Transcription Factor Family AT4G28500 73.684 3.87e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g02755 NAM 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02755 - - lja:Lj0g3v0297209.1 198.749