Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02748 ATGCTTGCAGTGTCACCATTGAGGAAAACTACCAAAGATGGAAACCAAGAAGAGATGGAGAGTTTTTCGATGGGGAGTACTACAATTACAACCGGTGACTTCGGCGACCTTTCCGAAGGAAATTTATTGGAAAGCATCAACTTTGACGACTTCTTTGTTGGCATCAACGTTGATGGAGACATCTTGCCGGATTTGGAGATGGATCCAGAGATGTTTGCTGAGTTCTCCGTTAGTTGCGGCGAGGAATCAGAGATGAATTCCTCGGCGTCATTGGAGAACAACAGCAAACTAGAAGAGAAGAATTCAAAGATAGATTATGAGGATAAAACAAGTTGTTCGGGTCAAGGCTCGGAAGAGATTGCAAGCAAAAGAGATAAATCTCTAGTTGTGAATCCATTGTTAAAAGATGCAGGTGGAAAAGGAAGAAAATCATCGAGTAAATCTAAGAATCCTCAAGGGAAGAGAAAAGTCAAGGTGGATTGGACACCAGAATTGCATAGGAGATTTGTGCAAGCTGTGGAACAACTAGGGGTGGATAAGGCGGTGCCTTCAAGGATTTTAGAGATTATGGGAATTGATTGTCTCACTCGCCATAACATTGCTAGTCACCTTCAGAAATATAGGTCACATAGAAAACATTTGCTAGCACGTGAAGCAGAAGCAGCAAGTTGGAATCAAAGGAGACAAGTATACGGTGGTGTAGGGGTGAAGAGAGAAGTGATCAGTCCATGGCCAGCTGCACCCACCATAGGTTTTCCTCCTCATCCTCCCCTTCCTCCTCCTCCTATGGCACCATTGCACCATTTTAGACCCTTACATGTATGGGGGCATCCTTCAAATATGGACCAGTCTTTTATGCACATGTGGCCTATACCGCAGCCGCTCTCGTGGACACCTTCGGCAGCTCCTCCACCACCTCAAGACCCTTCATTTTGGCATTCTCACCACCAACAGACTCTAACAAACGCAATGATCCGGCCAGGAACACATTGTTTCCCACCACCTCTGACAACAGTGAGACCATCATTTGGATGTTCAATCCCCGGAATCCCACCCCATGGCATGTGTAAAGCAGATCACGGCATTAGCACCCCTCCTGCTCCCGGTCACTTCTTCGACTTCCAACCGTCAAAGGAGAGCATAGACGCAGCTATTGGAGATGTTATATCAAAACCATGGTTGCCACTACCACTTGGACTCAAAGCTCCAGCACTTGATAGCGTAATGGGTGAACTACAAAGACAAGGAATTTCAGACATTCCACCCTAA 1269 0.4594 MLAVSPLRKTTKDGNQEEMESFSMGSTTITTGDFGDLSEGNLLESINFDDFFVGINVDGDILPDLEMDPEMFAEFSVSCGEESEMNSSASLENNSKLEEKNSKIDYEDKTSCSGQGSEEIASKRDKSLVVNPLLKDAGGKGRKSSSKSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWNQRRQVYGGVGVKREVISPWPAAPTIGFPPHPPLPPPPMAPLHHFRPLHVWGHPSNMDQSFMHMWPIPQPLSWTPSAAPPPPQDPSFWHSHHQQTLTNAMIRPGTHCFPPPLTTVRPSFGCSIPGIPPHGMCKADHGISTPPAPGHFFDFQPSKESIDAAIGDVISKPWLPLPLGLKAPALDSVMGELQRQGISDIPP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02748 422 Pfam Myb-like DNA-binding domain 159 208 IPR001005 -
Mepo2g02748 422 Gene3D - 153 214 - -
Mepo2g02748 422 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 422 IPR044825 GO:0003700|GO:0045893
Mepo2g02748 422 SUPERFAMILY Homeodomain-like 154 213 IPR009057 -
Mepo2g02748 422 FunFam Two-component response regulator 152 215 - -
Mepo2g02748 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 212 IPR017930 -
Mepo2g02748 422 MobiDBLite consensus disorder prediction 1 30 - -
Mepo2g02748 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 156 210 IPR006447 GO:0003677
Mepo2g02748 422 MobiDBLite consensus disorder prediction 83 121 - -
Mepo2g02748 422 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02748 Mepo-Chr2 37259021 37264297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02748 1 279 G2-like Transcription Factor Family AT5G44190 44.138 7.64e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo2g02748 Myb_DNA-binding 5.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02748 - - aprc:113858121 515.383