Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02739 ATGAGTAGTGTACTTTGTGAAGAGCAACAAAAACTTCTCCTTTCTCTCAAAAAGTCTCTCAGTCTAAGGGACACTATCATGGACAACATCCCACCAAGGAAGCTACTCACCCGCCGCTCACCCGCCACCACCGCCGTCACTGACATGTTTTCCGACGAGGATCCTTATTCCTCCGACCACTTCCGAATGTACGAGTTCAAAATCCGGCGATGCACCCGTAGCCGGAGCCACGACTGGACTGACTGTCCTTTCGCCCATCCAGGCGAAAAGGCACGCCGTCGTGACCCCCTCAGGTATCAGTACTCCGGTGAGGTGTGTCCTGATTACCGCCGCGGAAACTGCGACCGCGGCGAAGCGTGTGAGTTCTCCCACGGAGTTTTTGAATGCTGGTTGCACCCTTCAAGGTATAGAACTGAAGCTTGTAAAGATGGTAAAAATTGTAAGCGAAAAATTTGTTTTTTTGCTCATACACCTCGTCAACTAAGAGTTTTGCTTTTACCACCCCCTTCTCCTTCTCATACACCTCCTCAAAAAAACAACAAAAATTGTTGCTCTTTCTGTCATTGCTGTTCAAATTCTTCTTCACCCACTTCTACTTTGTTAAGTGGGCCCCATTTTTCTTCTTCAAATTCACCACCTTTGTCCCCTTTGTCCAATTCAAATTCTAAAGATGTGCATGTGCTTAATGAGCTTATTCGTTCTATGGAGAGTTTTAATTTTGGTGATGATATCATTCATGAGGCTAATTCACCTGTTTCTGCTAGCAAATTGAATTGGATTAATATTAACAATAATCCTAATTATGTTGCTAATTCTTCATTGGGTTGTGGAAAATATTATAATTCAAGTGGTGGTAGTGGCATGTTTTTGAGAGATGAACAGAGGATTAAGGTTGTTGATAATGATGTCACACCAGATTTTGGGTGGGTGAATGAGCTGCTGATGTAG 948 0.4378 MSSVLCEEQQKLLLSLKKSLSLRDTIMDNIPPRKLLTRRSPATTAVTDMFSDEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCDRGEACEFSHGVFECWLHPSRYRTEACKDGKNCKRKICFFAHTPRQLRVLLLPPPSPSHTPPQKNNKNCCSFCHCCSNSSSPTSTLLSGPHFSSSNSPPLSPLSNSNSKDVHVLNELIRSMESFNFGDDIIHEANSPVSASKLNWININNNPNYVANSSLGCGKYYNSSGGSGMFLRDEQRIKVVDNDVTPDFGWVNELLM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02739 315 Gene3D - 99 164 - -
Mepo2g02739 315 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 104 125 IPR000571 GO:0046872
Mepo2g02739 315 PANTHER UNKEMPT FAMILY MEMBER 48 314 IPR045234 -
Mepo2g02739 315 MobiDBLite consensus disorder prediction 201 220 - -
Mepo2g02739 315 ProSiteProfiles Zinc finger C3H1-type profile. 100 127 IPR000571 GO:0046872
Mepo2g02739 315 SMART c3hfinal6 100 126 IPR000571 GO:0046872
Mepo2g02739 315 SMART c3hfinal6 135 158 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02739 Mepo-Chr2 37182660 37183979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02739 52 261 C2H2 Transcription Factor Family AT5G07500 40.465 1.42e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo2g02739 zf-CCCH 5.6e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02739 K23047 - psat:127100681 410.609