Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02732 ATGGTTTGTTTGGGGTTTGATATGGTTGAGGTTGAAGCTCAAAGGTTGGAACTTTGTTTGGTTAAGAGGAAAGAAGTTTGTGTTTTGTCGAGGATTGTGTTTGGTTTGTTGGTGTTTCTGTTGTTTCTTAGTCCTGTGGCTGGTCTCAGACCATTAAGGGACAAAACTGGTTCATGGGGTGATGAGTGGATTTTTTCCGGAAAAGATGAAAGCGACTTAGGTCCATTTTCACAATGGAATATAACTGGAACTTACAGAGGGACGTGGAAGTTTTTAGATACTACCAATGGCTCTTCTAAATTTCCGGACATCAGAAAAATAAATGGAAACTCTGTAATTGAATTAGTTAGTACACCCACAAAGATAACTGGTGTACATTATGTGCAGGGGGTTGTTATATTCCACGATGTGTTCGACAACGAATACAATGTTGGGGGTGCCCAAATCAAAATAGAAGGTGTATATATATGGCCTTTTAGACAACTTCGAATGGTAGCCAACAGCGGAAAAGAGGGAGGGTTGAATCAAGATGGAGATTATATTTTATCCAATCCATATCATCTGCTTGGAGTTTTCTCATCTCAAGTATTCCAAGAATCTTCGCGACATACAATGTGGAGAAGAAAGCATTCTCCATTGCATGGCATGGAGAAAAACTGTAACGTTGAAATTTCAGCACGGGTTTCACGCTTGTCATCGTCAAAACATGATGGGGAGCATGATTCTTTTCAGCTGGAAGGATTAATGGAAAGTCCGTCTGTGGATGACGATGGAGATTGCATCTCACCATTACAATTAAATGCAACATCTATTAATATAGGAGTCTACTACAATAAAGCAGTGAATTATACCTTGATGGTTACCTTTGTCTCATTCTTGCAAGTTCTTCTGTTGATTCGGCAAATGGAGCATAGCAACACACAATCTGGGGCAGCGAAGGTTTCAATAATAATGATTGGTCAGCAAGCTATAGTGGATGCTTATCTTTGCCTTGTACATCTGACTGCAGGAATACTAGTTGAGTCTTTGTTCAATGCTTTTGCAACCGCTGCATTCTTCAAGTTCGTAGTTTTCTCAATATTTGAGATGAGATATCTCCTTGCCATTTGGAAAGCAAGTCGGCCTTTGAGTAACGGTGAAGGTTGGGAGACAATGAGGCGTGAGCTTTCGGTTTTATACAGCCGTTTCTATGGGATTCTGTTGGGCGGTATTCTATTCATGTATGAATTCCATAATTATTTGAGACCTATTCTGCTTCTTGTATACTCCTTTTGGATACCTCAGATAATCACCAATGTTATTCGAGATTCACGCAAACCATTGCATCCTCATTATATATTAGGCATCACCGTTACTCGGCTAGCAATCCCATTATACGTTTTTGGTTGTCCTAACAACTTCTTGCGCATAGAACCAGATCAGAGCTGGTGTGTTTGTTTGGTTTTATTTACTGGATTTCAAGCCGCAATTCTCCTTCTTCAGCATTACCTCGGCTCTCGTTGGTTCATTCCTCATCAGATTCTACCCGAGAAATACAGCTATTATAGGAGGTCTTCGCAGGATACAAATCATGCCACGGACTGTGTTATTTGCATGACAGCCATTGATCTCACGCCGCGATCAAATGATTGCATGGTGACACCTTGTGATCATTTTTTCCACACTGGCTGTTTACAAAGATGGATGGATATAAAGATGGAGTGCCCAACATGTCGGCGCCCGCTCCCACCTGCATGA 1737 0.4099 MVCLGFDMVEVEAQRLELCLVKRKEVCVLSRIVFGLLVFLLFLSPVAGLRPLRDKTGSWGDEWIFSGKDESDLGPFSQWNITGTYRGTWKFLDTTNGSSKFPDIRKINGNSVIELVSTPTKITGVHYVQGVVIFHDVFDNEYNVGGAQIKIEGVYIWPFRQLRMVANSGKEGGLNQDGDYILSNPYHLLGVFSSQVFQESSRHTMWRRKHSPLHGMEKNCNVEISARVSRLSSSKHDGEHDSFQLEGLMESPSVDDDGDCISPLQLNATSINIGVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIIMIGQQAIVDAYLCLVHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSVLYSRFYGILLGGILFMYEFHNYLRPILLLVYSFWIPQIITNVIRDSRKPLHPHYILGITVTRLAIPLYVFGCPNNFLRIEPDQSWCVCLVLFTGFQAAILLLQHYLGSRWFIPHQILPEKYSYYRRSSQDTNHATDCVICMTAIDLTPRSNDCMVTPCDHFFHTGCLQRWMDIKMECPTCRRPLPPA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02732 578 SMART ringv_2 527 572 IPR011016 GO:0008270
Mepo2g02732 578 SUPERFAMILY RING/U-box 509 577 - -
Mepo2g02732 578 ProSiteProfiles Zinc finger RING-type profile. 528 572 IPR001841 -
Mepo2g02732 578 PANTHER RING ZINC FINGER PROTEIN 129 577 - -
Mepo2g02732 578 Pfam Ring finger domain 527 572 IPR001841 -
Mepo2g02732 578 SMART ring_2 528 571 IPR001841 -
Mepo2g02732 578 FunFam E3 ubiquitin-protein ligase, putative 514 578 - -
Mepo2g02732 578 CDD RING-H2_TUL1-like 522 577 - -
Mepo2g02732 578 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 513 578 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02732 528 575 C3H Transcription Factor Family AT4G12190 39.583 1.75e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02732 K23788 - gmx:100817871 1053.12