Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02721 ATGGATCAAGTTGGAAGTGATCAACCTTCTAGCTCTAATACAACCAAAGTTGAAAGAAGGCTCGTTGAAAAAAACAGAAGAAATCAGATGAAGATCCTCTACTCCAAACTCAACTCTCTTCTTCCTAACTATAACCCCAAGGAATTAGCGTTGGCGCTACCGGATCAAGTAGATGAGGCGATAAACTACATAAAAAGTTTAGAGGCAAATGTGAAGATGGCTAATGAGAAGAAAGAAAAGTTATTAGCAGGAAAGAATAAAAGATCACGTGAATATTGCTTAGGTCTACCAAAATCACCATGTTTTGAAATTCACGAAATTGGTTCTTCTCTACAAATCATTCTCACGTGTGGTTTAGATAACCAATTCATTTTCTATGAAATCATTCGTGTGTTACATGAAGAGAATGTAGACGTAAGGAGTGTCAATTCCTCTAAGGTTGGAGATAATTCACTCCTTCATGTTGTTCATGCTGAGGTATATATATCTAAATCAATATTTGATGCTTAA 510 0.3569 MDQVGSDQPSSSNTTKVERRLVEKNRRNQMKILYSKLNSLLPNYNPKELALALPDQVDEAINYIKSLEANVKMANEKKEKLLAGKNKRSREYCLGLPKSPCFEIHEIGSSLQIILTCGLDNQFIFYEIIRVLHEENVDVRSVNSSKVGDNSLLHVVHAEVYISKSIFDA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02721 169 Pfam Helix-loop-helix DNA-binding domain 17 68 IPR011598 GO:0046983
Mepo2g02721 169 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 83 IPR036638 GO:0046983
Mepo2g02721 169 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 159 - -
Mepo2g02721 169 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 14 67 IPR011598 GO:0046983
Mepo2g02721 169 Gene3D - 6 93 IPR036638 GO:0046983
Mepo2g02721 169 Coils Coil 57 84 - -
Mepo2g02721 169 FunFam Transcription factor bHLH162 6 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02721 Mepo-Chr2 36982857 36984286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02721 8 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.857 1.18e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g02721 HLH 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02721 - - tpra:123913718 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02721 2 36982857 36984286 Mepo2g02721 2 36982857 36984286 ECH
Mepo6g03660 6 48796681 48800007 Mepo2g02721 2 36982857 36984286 PCT