Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02704 ATGATGGGGAGAGCACCATGCTGTGATGAAATTGGTTTGAAGAAGGGACCTTGGACACCAGAAGAGGACAGAATATTGGTGAATCACATTAAGAAACATGGCCATGGAAGTTGGAGAGCACTTCCAAAGCTAGCAGGATTGAACAGGTGTGGGAAGAGTTGCAGACTAAGGTGGACTAACTATTTAAGACCTGATATCAAAAGAGGACAATTCACAGATGAAGAAGAGAAAACAATCATCAATTTGCATGCTGTTCTTGGGAATAAGTGGTCAGCTATAGCAGGTCATCTACCAGGGAGGACTGATAATGAAATAAAGAATTTTTGGAACACTCATTTAAAGAAAAAGCTTCTTCAAATGGGATTAGATCCAGTGACTCATCGTCCAAGAATTGATCATCTCAATCTTATGACCAATCTTCAACAGCTTCTTGCTGCAAACGTTCTCAATTATTTTTCAAACACTTGGGACACTGCTACTACTAATGCTCTTAGGCTTCAATCTGATGCAACCAAATTCCAATTGCTTCAAAACATGGTTCAAATTCAAGCCCTTAGTGCCAATATTCCTACTCCTACCTCAAACTTGCAATTACTCAATCCATTTGGACAATCTTCATCTTCATCGCAGCAAGAAAATTTTCTAAATGAACTTTTAGGATTGAATCAGTCCAATTATGCTTCTCAAAACCAGTGCAATTTTCAAACCTTTGAAGTACCTCAGATGCAACAAGTTTTAAGCAATGGATATCAGTTTATGGATAATGGTGGAAGCAGCAATAGTAGTAGTTGCTTGAAGTCTGATCAAAAGGTTGATGAAGTATTTGATGCTACAAATTCTTCTTCAACGGTACCGATAAATTCGCTACCGAATTTGGTTTCAGTTTCACCAGAATGTTCTAGTGTGAAAGAGATGATGGGAAACAAGGTGAACCAAAATGAGTGTTCCAATCCTTCTTCAACTTCAACTACCTTTGAAATGTTGGGAGATTTCATGTATGAGGATGTAAGCGATGCTTATTGGAAAGATCTCTTAGACCAAGATCCTACCTTGCAGCCATAA 1062 0.3842 MMGRAPCCDEIGLKKGPWTPEEDRILVNHIKKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGQFTDEEEKTIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQMGLDPVTHRPRIDHLNLMTNLQQLLAANVLNYFSNTWDTATTNALRLQSDATKFQLLQNMVQIQALSANIPTPTSNLQLLNPFGQSSSSSQQENFLNELLGLNQSNYASQNQCNFQTFEVPQMQQVLSNGYQFMDNGGSSNSSSCLKSDQKVDEVFDATNSSSTVPINSLPNLVSVSPECSSVKEMMGNKVNQNECSNPSSTSTTFEMLGDFMYEDVSDAYWKDLLDQDPTLQP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02704 353 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mepo2g02704 353 Gene3D - 70 117 - -
Mepo2g02704 353 CDD SANT 71 113 IPR001005 -
Mepo2g02704 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mepo2g02704 353 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mepo2g02704 353 FunFam Transcription factor MYB39 70 131 - -
Mepo2g02704 353 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mepo2g02704 353 SMART sant 67 115 IPR001005 -
Mepo2g02704 353 SMART sant 14 64 IPR001005 -
Mepo2g02704 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 266 - -
Mepo2g02704 353 Gene3D - 12 68 - -
Mepo2g02704 353 FunFam MYB-related transcription factor 14 67 - -
Mepo2g02704 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Mepo2g02704 353 CDD SANT 17 62 IPR001005 -
Mepo2g02704 353 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mepo2g02704 353 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02704 Mepo-Chr2 36819271 36821627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02704 2 346 MYB Transcription Factor Family AT5G16770 48.451 5.08e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g02704 Myb_DNA-binding 6.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02704 K09422 - gmx:547488 473.396