Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02686 ATGGGAACAAGATCGCAGCAATCGTGTGTAGACGAAGAGGAGGAGGAATTTCTCGGTTGTGGAACCACGATTTCGGGACAATCAGGCTCAACCAGCAGGAGTGCCGGCGGCTTGCCGTCTAGCCGGAGCGAGCAGACGATCGGGACAGCCGGTGATAACACTGCTCTTAGATTAAATCATCTTGATATACAGGATGATGATGCTGCATCCCAAGGAGTAGTTGCTAGCAAGAAGAAAAAGAGAGGCCAACAACGAGCTACCGGAGGTGATAAAAGTGGGAGAGGGCTTCGCCAATTTAGCATGAAAGTGTGTGAGAAGGTAGAAAGTAAAGGAAGAACAACTTACAATGAGGTGGCAGATGAACTTGTGGCTGAATTTGCTGATCCAATCAACAGTGTTTTGACCCCTGATAAGCAACAATATGATGAGAAAAACATTCGTCGAAGGGTCTATGATGCTCTGAATGTTCTCATGGCAATGGATATTATTTCTAAGGATAAAAAGGAAATACAATGGAAGGGTCTTCCTCGTACTAGTCTGAATGATATTGAAGAGCTAAAGACAGAGCGTCTTGGGCTCAGGAATAGAATTGAAAGGAAATCATCCTATCTGCAGGAGCTAGAGGAACAATTTGTAGGTCTTCAGAACCTTATTAAACGAAATGAACAATTATATAGCTCTGGAAATCCTCCCAGTGGAGGTGTATCTTTACCCTTTATTCTGGTACAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGACATGCAGCTTGTTCATTTTGATTTTAATAGTACTCCTTTTGAGTTGCATGACGACAATTATGTGCTCAAGGCAATGGAATTTGGTGATAGAACACAGAGTGATATTGTTACACACAATGTTACAGATGGAGGGGAAGGTTCTAGCATGTCAGGCATGCATCAGTCACAGGTTCCTCCTTCGGCTTCAAGCGTGACAACTAGACCTCCAACGTCACCTCCACTCCCTGGAATATTAAAGGCAAGAGTCAAACAAGAGCATTGA 1032 0.437 MGTRSQQSCVDEEEEEFLGCGTTISGQSGSTSRSAGGLPSSRSEQTIGTAGDNTALRLNHLDIQDDDAASQGVVASKKKKRGQQRATGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPINSVLTPDKQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIERKSSYLQELEEQFVGLQNLIKRNEQLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMEFGDRTQSDIVTHNVTDGGEGSSMSGMHQSQVPPSASSVTTRPPTSPPLPGILKARVKQEH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02686 343 CDD DP_DD 179 282 IPR014889 -
Mepo2g02686 343 MobiDBLite consensus disorder prediction 293 343 - -
Mepo2g02686 343 FunFam Transcription factor-like protein DPB 86 179 - -
Mepo2g02686 343 Gene3D - 86 179 IPR036388 -
Mepo2g02686 343 FunFam Transcription factor-like protein DPB 180 304 - -
Mepo2g02686 343 MobiDBLite consensus disorder prediction 293 321 - -
Mepo2g02686 343 SMART DP_2 181 341 IPR014889 -
Mepo2g02686 343 Pfam Transcription factor DP 182 296 IPR014889 -
Mepo2g02686 343 SUPERFAMILY "Winged helix" DNA-binding domain 94 175 IPR036390 -
Mepo2g02686 343 Coils Coil 190 224 - -
Mepo2g02686 343 MobiDBLite consensus disorder prediction 1 53 - -
Mepo2g02686 343 MobiDBLite consensus disorder prediction 21 53 - -
Mepo2g02686 343 MobiDBLite consensus disorder prediction 69 94 - -
Mepo2g02686 343 Gene3D Transcription factor DP 180 314 IPR038168 -
Mepo2g02686 343 SMART E2F_TDP_2 91 174 IPR003316 GO:0005667|GO:0006355
Mepo2g02686 343 Pfam E2F/DP family winged-helix DNA-binding domain 94 174 IPR003316 GO:0005667|GO:0006355
Mepo2g02686 343 PIRSF Txn_factor_DP 2 343 IPR015648 GO:0005667|GO:0051726
Mepo2g02686 343 SUPERFAMILY E2F-DP heterodimerization region 180 291 IPR037241 -
Mepo2g02686 343 PANTHER TRANSCRIPTION FACTOR DP 23 319 IPR015648 GO:0005667|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02686 Mepo-Chr2 36638934 36643190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02686 63 283 E2F-DP Transcription Factor Family AT5G02470 52.252 2.74e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mepo2g02686 DP 2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02686 K04683 - qsu:112000390 524.628