Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02685 ATGGGAACGCAGCCGCATCAATCGTCTGTAGACGAAGAGGACGAGGAATTGATGGGTTGTGGAGCTACGATTTCCGGCCAATCAGGGTCCACGAGCAGGAGTGCCGGGTTGCCGTCTAGCCGGAGTGAGCAGACAACGGGGACAGCCGCCGGTGATAACGCTGCTCTCAAATTGAATCATCTTGATATACATGATGACGATGCTGCTTCCCAGGCAGTACTTGCTACCAAGAAGAAAAAGCGGCGGGCTGTTGGGGGTGATAAGAATGGAAGAGGGCTCCGGCAATTTAGTATGAAAGTGTGTGAGAAGGTAGAAAGTAAAGGAAGAACAACTTACAATGAGGTGGCAGATGAACTCGTGGCTGAATTTTCTGATCCAAGCAATGGCGGTTTGTCCCCTGATCAGCAACAATATGATGAGAAAAACATCCGCCGAAGGGTCTATGATGCTCTGAATGTTCTTATGGCTATGGATATTATCTCCAAGGATAAAAAAGAAATACAATGGAAGGGTCTTCCTCGTACCAGTCTGAGTGATATCGAAGAACTAAAGACACAGCGTCTTGGGCACAGGAGTAGAATTGAAAGGAAAGCAGCCTATCTGCAGGAGCTTGAGCAGCAATTTGTAGGTCTTCAGAACCTTATTCAACGAAATGAAAAATTATATAGCTCAGGAAATCCTCCTAGTGGAGGTGTATCTTTACCTTTTATTCTGGTTCAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGACATGCAGCTTGTTCATTTTGATTTCAATAGTTCTCCTTTCGAGCTGCATGACGACAATTATGTTCTCAAGGCAATGGATTTTGGTGATGGCGAGAGACCACAGAGTGACAATGTTGCACACAATATTGCGGATGGAGGGGAAGGTTCTAGCATGTCAGGCATGTATCAATCACAGGTTCCTCAGTCAGTTTCAAATATGTTAGTTAGGCCTCCAACATCACCTCCACTCCCTGGAATATTAAAGGCAAGAGTTAAGCAAGAGCATTGA 1029 0.4538 MGTQPHQSSVDEEDEELMGCGATISGQSGSTSRSAGLPSSRSEQTTGTAAGDNAALKLNHLDIHDDDAASQAVLATKKKKRRAVGGDKNGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFSDPSNGGLSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLSDIEELKTQRLGHRSRIERKAAYLQELEQQFVGLQNLIQRNEKLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSSPFELHDDNYVLKAMDFGDGERPQSDNVAHNIADGGEGSSMSGMYQSQVPQSVSNMLVRPPTSPPLPGILKARVKQEH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02685 342 SMART DP_2 178 340 IPR014889 -
Mepo2g02685 342 MobiDBLite consensus disorder prediction 323 342 - -
Mepo2g02685 342 FunFam Transcription factor-like protein DPB 177 303 - -
Mepo2g02685 342 SUPERFAMILY "Winged helix" DNA-binding domain 91 172 IPR036390 -
Mepo2g02685 342 PANTHER TRANSCRIPTION FACTOR DP 22 316 IPR015648 GO:0005667|GO:0051726
Mepo2g02685 342 Pfam E2F/DP family winged-helix DNA-binding domain 91 171 IPR003316 GO:0005667|GO:0006355
Mepo2g02685 342 MobiDBLite consensus disorder prediction 23 48 - -
Mepo2g02685 342 CDD DP_DD 176 279 IPR014889 -
Mepo2g02685 342 FunFam Transcription factor-like protein DPB 83 176 - -
Mepo2g02685 342 SMART E2F_TDP_2 88 171 IPR003316 GO:0005667|GO:0006355
Mepo2g02685 342 PIRSF Txn_factor_DP 2 342 IPR015648 GO:0005667|GO:0051726
Mepo2g02685 342 Gene3D Transcription factor DP 177 312 IPR038168 -
Mepo2g02685 342 MobiDBLite consensus disorder prediction 1 48 - -
Mepo2g02685 342 SUPERFAMILY E2F-DP heterodimerization region 178 284 IPR037241 -
Mepo2g02685 342 Pfam Transcription factor DP 179 289 IPR014889 -
Mepo2g02685 342 Gene3D - 81 176 IPR036388 -
Mepo2g02685 342 Coils Coil 201 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02685 Mepo-Chr2 36633138 36637522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02685 63 279 E2F-DP Transcription Factor Family AT5G02470 51.835 3.55e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mepo2g02685 DP 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02685 K04683 - cave:132186448 530.791