Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02676 ATGATGCGGTTGCAGACATATGCGGGTCTTAGTTTAATTGCCACTTTGGCTATTACATATCATGCATTTAACAGCAGAGGCCAGTTTTATCCGGCAATGGTTTATTTAGCAACTTCCAAGATCAGTTTAGTGCTTCTTCTCAACATGGCTCTAGTCATCATGTGTGTTATGTGGCAGTTAACTAAAAAGGTGTTTCTTGGTTCTCTTCGGGAGGCCGAGGTTGAGAGGCTTAATGAGCAAGCATGGAGGGAGGTTATGGAAATCCTCTTTGCAATTACTATCTTTAGACAGGATTTCTCTATTACATTCCTTGCCATGGTTACGGCACTCTTGTTAATCAAGGCTTTGCATTGGTTGGCTCAGAAGAGAGTAGAGTACATAGAGACTACACCTTCCGTGTCCGTGTTGTCTCAAGTTCGAATCGTATCTTTTTTGGGGTTCCTTCTTCTTCTTGATGGCGCGTTTTTGTACAGTTCAGTGAAGCATTTACTAGCTACCAAGCAGGCTTCGGTTTCGATATTCTTTTCTTTTGAGTACATGATACTAGCAACAACAACAGTATCAATTTTTGTAAAATATATTTTCTATGTCAGTGACATGCTTATGGAGGGGCAATGGGAAAAGAAACCAGTCTTCACGTTTTACTTGGAACTTGTTAGGGACTTGCTTCACTTGTCTATGTATATGTGCTTCTTTTTGGCAATTTTCATAAACTATGGTGTTCCTTTGCACTTAATAAGGGAGCTATACGAGACATTTAGGAACTTCAAAGTTCGTATTTCAGATTATCTACGTTATCGTAAGATCACTTCTAACATGAATGATCGGTTTCCAGATGCAACCCCTGAAGAGCTTAATTCAAATGACTTAACCTGTATCATCTGTCGTGAAGAGATGACTACTGCAAAGAAACTTATATGCGGTCATCTTTTTCATGTTCATTGCCTCCGATCATGGCTAGAGCGGCAGCATACTTGCCCTACCTGCAGAGCACTGGTTGTCCCATCAGAAAATGGACCAACTGCTACTGGGGGACAGCAAAGACCACAGTCAGATGCTCATCGACAAGGGGAAGGCACTGGAAGCTCAGCTCAAACTGAGGTTGGCGATGGGGTGGCTCGTGATAATTTGAGTCGGCATCAAGCAAGACTTCAAGCTGCAGCAGCTGCAGCTTCAATATACGAGAAGTCTTATGTTTACCCTTCTCCAACTTTTGCATGCTCCCCTGGCTACACTCTTTATCCCTCGGTTCATAGATCAGTGGTTCAATCATCTAATAATGCTGAGCTTGATGGAGAACAAGTTTCCAGTGAGCAAGCACAAAAGCAGTTTGTGATCCCCGGTGGACCAATGAATGCATCCTCTTCTCCAGTGCAAAGCTTCTATGTTCCACCATCTCAAACACATGCAGCCCACATGACTTATGGAGAGGGATCCCAGCTGGGAGCTCAGACAAAACTCCAGAACGAGAAAACAAATGTTGACAAACGTGTAGTTGAGGACACGTCGGTATCAGATAGCAGAGGCAAATACATTGCTGCCTCTTCATCTGCATCAAGTCATGATGAGAGTCAAGACAGCAAAGCATAA 1590 0.4302 MMRLQTYAGLSLIATLAITYHAFNSRGQFYPAMVYLATSKISLVLLLNMALVIMCVMWQLTKKVFLGSLREAEVERLNEQAWREVMEILFAITIFRQDFSITFLAMVTALLLIKALHWLAQKRVEYIETTPSVSVLSQVRIVSFLGFLLLLDGAFLYSSVKHLLATKQASVSIFFSFEYMILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELVRDLLHLSMYMCFFLAIFINYGVPLHLIRELYETFRNFKVRISDYLRYRKITSNMNDRFPDATPEELNSNDLTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPSENGPTATGGQQRPQSDAHRQGEGTGSSAQTEVGDGVARDNLSRHQARLQAAAAAASIYEKSYVYPSPTFACSPGYTLYPSVHRSVVQSSNNAELDGEQVSSEQAQKQFVIPGGPMNASSSPVQSFYVPPSQTHAAHMTYGEGSQLGAQTKLQNEKTNVDKRVVEDTSVSDSRGKYIAASSSASSHDESQDSKA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02676 529 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 338 IPR013083 -
Mepo2g02676 529 MobiDBLite consensus disorder prediction 508 522 - -
Mepo2g02676 529 MobiDBLite consensus disorder prediction 337 369 - -
Mepo2g02676 529 SUPERFAMILY RING/U-box 272 336 - -
Mepo2g02676 529 PANTHER RING ZINC FINGER PROTEIN 1 469 - -
Mepo2g02676 529 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Mepo2g02676 529 MobiDBLite consensus disorder prediction 480 529 - -
Mepo2g02676 529 MobiDBLite consensus disorder prediction 339 369 - -
Mepo2g02676 529 MobiDBLite consensus disorder prediction 490 504 - -
Mepo2g02676 529 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 264 339 - -
Mepo2g02676 529 SMART ring_2 292 329 IPR001841 -
Mepo2g02676 529 CDD RING-H2_synoviolin 289 330 - -
Mepo2g02676 529 Pfam Ring finger domain 291 330 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02676 Mepo-Chr2 36538785 36545027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02676 1 410 C3H Transcription Factor Family AT3G16090 75.545 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02676 K10601 - gmx:100816441 759.985