Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02668 ATGATGAGCCCTCTGATCAGAATCGCGTTAGCAATAAACTTATTTTCTAGTTCCTATACCTTAAGAAAGCTCATCAAATACTCAACTCATCTTCATACTCTTCTCAAGTGGATATTCAATTTATTTACCAACTATCTATGCTATCCCTTATGCAAGCTCCAAGGTTCTTATCATCATCAGCAAAGGGTATGTAGATATGTGTCCCAATCCCAAGATGAAGAAGTAGATTGTGCTGTGTGTCTCTGCACAGTGAAAGAAAAGGAAGAGATTAGAGTCCTAAAGTGTGAACATGTCTTCCACAAAGATTGTTTGAATACTTGGTTTAGCTTCAAATACAACAATACAACTTGTCCTCTTTGCAGAGTTTCAGTTGGTCCAATAAGAGACCTTGATACTAAAGTTATACATGATGCTGCTGATTTTCAGATACCATGGCTGCGGTGA 444 0.3761 MMSPLIRIALAINLFSSSYTLRKLIKYSTHLHTLLKWIFNLFTNYLCYPLCKLQGSYHHQQRVCRYVSQSQDEEVDCAVCLCTVKEKEEIRVLKCEHVFHKDCLNTWFSFKYNNTTCPLCRVSVGPIRDLDTKVIHDAADFQIPWLR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02668 147 Pfam Ring finger domain 76 121 IPR001841 -
Mepo2g02668 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 128 IPR013083 -
Mepo2g02668 147 SMART ring_2 77 120 IPR001841 -
Mepo2g02668 147 SUPERFAMILY RING/U-box 62 128 - -
Mepo2g02668 147 ProSiteProfiles Zinc finger RING-type profile. 77 121 IPR001841 -
Mepo2g02668 147 PANTHER - 63 126 IPR044249 -
Mepo2g02668 147 SMART ringv_2 76 121 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02668 Mepo-Chr2 36459974 36460667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02668 76 124 C3H Transcription Factor Family AT1G15100 55.102 4.53e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02668 K16282 - mof:131154354 80.4925