Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02613 ATGCCTATGGTGGAGGATGGACAAACGCTCATGCTACCTTCAATGGAGGAATCAAGGTATGGAACAAACACTGCTGCTTTGAGTACAACACTTTTCAGCAATGGTTTAAGCTGTGGCTTTTGCTATGAAATTAGGTGTGCTAATGACCATAGATGGTGCCTTCCTGGTTCCATTGTGGTCACTGCCACAAATTTCTGTCCGCCAAACAATGCTTTACCAAACAATGATGGTGGTTGGTGTAACCCTCCTCTCCAACATTTTGATCTTGCTCAACCTGTTTTCCTTCGTATTGCTCAATACAAGGCTGGAATTGTTCCTGTAGATTTTAGAAGGGTGTCATGTAGAAGAAATGGGGGTATAAGGTTTACTATCAAATCAATGGACATTCTTACTTTAACCTAG 402 0.4179 MPMVEDGQTLMLPSMEESRYGTNTAALSTTLFSNGLSCGFCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVDFRRVSCRRNGGIRFTIKSMDILTLT 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02613 133 CDD DPBB_EXPA_N 18 114 - -
Mepo2g02613 133 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 7 119 IPR007112 -
Mepo2g02613 133 Gene3D - 5 115 IPR036908 -
Mepo2g02613 133 PRINTS Expansin signature 46 57 IPR002963 GO:0009664
Mepo2g02613 133 PRINTS Expansin signature 58 68 IPR002963 GO:0009664
Mepo2g02613 133 PRINTS Expansin signature 94 107 IPR002963 GO:0009664
Mepo2g02613 133 PRINTS Expansin signature 118 130 IPR002963 GO:0009664
Mepo2g02613 133 PRINTS Expansin signature 19 33 IPR002963 GO:0009664
Mepo2g02613 133 PRINTS Expansin signature 77 94 IPR002963 GO:0009664
Mepo2g02613 133 Pfam Lytic transglycolase 24 108 IPR009009 -
Mepo2g02613 133 PRINTS Expansin/Lol pI family signature 102 118 IPR007118 GO:0005576
Mepo2g02613 133 PRINTS Expansin/Lol pI family signature 6 24 IPR007118 GO:0005576
Mepo2g02613 133 PRINTS Expansin/Lol pI family signature 28 46 IPR007118 GO:0005576
Mepo2g02613 133 PANTHER EXPANSIN-A15 16 129 IPR002963 GO:0009664
Mepo2g02613 133 SUPERFAMILY Barwin-like endoglucanases 19 126 IPR036908 -
Mepo2g02613 133 SMART dpbb_1 24 109 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02613 Mepo-Chr2 35834808 35835495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02613 20 132 Expansin Gene Family AT1G69530 78.761 2.95e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02613 - K20628 gmx:100527059 217.238