Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02608 ATGGAATTCGTCGGGAAAATCGTTCAGAAATCGGTGGACGGTGGTGGAATACTCACCGGAACTGTCAAATCTCACAATTCTTCGTCAGGTTTGTTGGAGATCGTTTTCGAGGATGGTCATTGCGAGGAGATGGAAGTTTCTGAGGTGGTTTCGTTGCTGGAAATTCAACCGGAGGTGGTGAAAGTCAAAGCTAGGGTTGGTCGGGAACCTAAAAAACGACACCGCACCTCGGAGACGACATCGTGTTCAGGTAGTGGTAGTGATAATTTGGTGGCGGGTAGTGAAATTAGCGGGATTTTGAATGGCGGTGATGAGTCTAGTGGCGGGAATGATGGGGATGTTGTGGGAAATGGGAATGGGAGTAGTGGGAGTGATGAAAAAGTAGGTAGTGAAAATAGGTTTGGTTTTGAAGAGATTTCAAATTTGAATGGGGGTGTTTCTGATATTAATTATAATGGAATTTGTGTTAAAGACGGTGTTGATTTGAATGGTAGTGTTAATTTGAATGATAATGGAATTCGTGTTAAAGATGGTGTTGATTTGAATGCTAGGGTTAATTTGAATGAGAATGAGGGTGTTTCTGATAATGATAATGGGATTTGTGTTAAGGATGATATTGATTTGAATGCTAGGGTTAATTTGAATGAGGATATGGATTTAAATGATGTGTGTGATTTGAATTTTGATAATGAGGGTGGTTTGGAGAGAAGAGAAGGTATTGATTTGAATTTGGATGTGAATGTTGATGAGGGTGTGAATTTGGATGCGAATTTGGGAGGGGAAATGTTACGGCGGGAATGTAAATTTGATTTGAATGTGGGTGTGTGTGAAGAAGTTAAGGAGGTTCAGGGTTGTGCTGAAGGAAATGGGCATTTTGTGGTAGATGGCGAGACGGGTCAGCTGCGAGAAGTCGGGTTAGATGTTGAGCATAGGTCTATGGAAGTTGATGGTGTTCGTGGTGATTTGGATTGTGTCTCTGATGCTGTCAAATCGGAGGAATTTCGTGTTTCGGTTGAGAATATAGCTGAAGATGCATCTTTGTGTTTCATTGAGGAAAAGGAAAGTCATGATGGCAAAGAAAATGCGGCGGCTATTGGCTCTCCTATGGTTCTGGATGGTTTATCTGGTGAAAATGTGGCCGCTATTGACTCTCCTATGGTTCTAGATGGTGTTTCTGTTAGGGATTGTGATTATGTTTCCTTGGAAGCTGGCGTTGCAGCAGTTGATGAATGCCAAGATGATCCAGGAAGTCCATGCAAACAAGAAAGTAGTCAGAGGAAGAGAAGGAAAGTCTCAAATAATCCAAAAGCCACCCCGGAAACGGCTTTGAGGAGGAGTTCTCGCCGGGTGTCAGCTAGAAAACAGGTGCAGGTGACCGATGATCCTCTGTCGTCCTTGGAAACCAGTGTAACAGAAGAAAAACCTTCAATGCCTGGAAGTGAGAAATACGAACAGTGCAATGTTCCTATTCTGAAGCTGCAATTACCCCCTTCTTCTCAAAATTTGCATTTAGATGACATTCCTGTTCTTGAATTTTTTTCTGTCTATGCTTATTTAACTTCATTCAGTACCTTGTTATTTTTGAGTCCATTTGAGTTGGAAGATTTTGTGGCTGCACTTAAGTCTGAAATCCCTAGTATATTACTTGACAACATTCATGTTTCTATTTTGCACACTCTGAGAAAGCATTTGGAATTCCTTTCCAGTGAGGGTTGCCAATCTGCATCCATTTGCCTGAGGAATCTTAACTGGGATTTCTTGGACCTTGTCACATGGCCCATGTTCATGGCCGAGTACCTTCTGATTCACAGTTCTGAATTTAAAATTAGTTTTGATGCTAACCTCTCAATGTTCGGAACTGACTACTACAAACAACCTGTCAATTTGAAGCTTGAGATTCTTCAGTACCTTTGTGATGATATGATTGAAACAGACACCATAAGGACAGAAATGAACAGAAGATCTTTGGTAATAGAGACCGGTATGGGTTTTGATCAGAATATTTATTTTGACACTGGTAAGAAAAAAAGAGCTGCAATGGATGTTTCTGGTGGCTCTTGCTTGACCGAGGAGATTGTGGATGACACAACTGACTTGAACAGTGATGAATGTTGCCTTTGCAAGATGGATGGAAATTTAATATGTTGTGATGGTTGCCCTGCTGCATTCCACTCAAGGTGTGTCGGGATTGCAGGTGACAGTCTTCCTGAAGGTGACTGGTATTGCCCTGAGTGTGCTATTGGCACACACCGGGCTTCGATGAAATCACGAAGATCACTTCGAGGAGCAGACTTGTTGGGGACAGATCCTCACGGCTGTCTTTATTTTGATAGCTGTGGTTACCTGTTAGTTTCTAACTCATCAGATGCGGGGTCCTTGTGCAATTACTACCATAGAAATGATATACATGTTGTAATTGAAGTTCTAAGGTCTATGGGTGCTTTATATGGAGACTTATTAATGACTATCTGCAAGCACTGGGATCTTCCGTCTGACTTAAATGCAGAGGCTAGTAGTTTGGCAGTCTTCAATCGAAGTTCCTGCAAGAACATGCGAATGACGGCGGAATATTATGCTACGCCTACATCTTTAGCACCTTTTACTTCTTCAGAACCATGTATGGGCAAGAATCTGGTTGATGATCACAAAAAGTTGAAGAAAAATTCAACTATTGACTGTTGTATTCAAGATGGCCAAGACTTTCCAAAAGGTGGGAACCAATTAGAGTCAACAATAGAAAGTCCTGGTATTGCCTCAAAAGGATCAGCTGATACCTCACAATTGAGATCAGGCATCGAGAGTATTCAGATGCACAGGCTATATGATTCCAATAGATCCATAGCTGTTAGCAGTACCGCTGGCAATGAGGATACATCACAGGCATCTTATGGGACTGACTACATAAACTATTACAGCCTTGCCAGGGTGCCCTCATTAGTTGCGCAGGAATTGATGCGTAAGTCACCTGAAAAGATCAATAAAAATATTGTGATGACTGAGGAAGATGTTGTTTCAGACCAAACAAAGTCCATTATGAAGAAGTCCAGCAACTTTTGTTGGCCAAGTATTCAAAACCTGAATGCAGCTGCCCAAATGGAAAAATGTGGGTGGTGCTTTTCTTGCAAGGTTGCAAATGATGGCAGAGATTGCTTGTACATTTCGGTGGTGAAACCTCTTGATGAAGTGTCTAAAAGTACTTCAGTTGAGCTTCAACCCAGGAAGATCCAGAATGGACATCTTCGAGCGATAATATGTCATATTTTCTCTCTTGAGGTTCGACTGCGGGGTCTTTTATTGGGTCCATGGTTGAATCTGCATCAAACAAATCTTTGGCATGAAGATCTTTTGAAGACATCCGATTTTCTTTCTGTCAAACGATTATTGCTTCTTTTGGAATCCAATTTGAGACATCGTGCACTTTCAGCCGATTGGTTAAAGCATGTGGATTCTGTGGGTACTATGGGATCAGCTACTCATATTGTGGTCAATTTATCACGAACATCCTCAAAGCATGGTGTTGGAAAGAAAAGGGCTAGACATTCGGATATTGAATCCAGTTCATCTTCAAAGACTACTGGTGGTTTGGTAATGTATTGGTCAAGAGGTGGTAGGCTTTCCCGAAAGTTGTTTAATTGGAAGGTCCTGCCTCGCTCCTTCGTTGCCAAAGCTGCTAGACAAGCTGGGTTTACAAAGATACCAGGTATTTTATATCCTGAAAATTCAGACTTTGCAAAGAGAAGCAGATGTGTTGCCTGGCGAGCTGCTGTTGAGATGTCAACTAGTGTTGAGCAGTTGGCTTTACAGGTTAGAGAACTCTATTCAAACATAAGGTGGCATGATATTGAGAATAGCCATCCTTTACATGTATTGGACAAGGAATCTAAAAAATCAGTCAGGCTATTCAAAAAAGCAATTGTACGCAGGAAGTGCACCGAAGGACAATCTGTGAAATACCTTCTTGATTTTGGGAAGAGAAGGGGTATTCCAGATGTTATTGTTAAACACGGTTCGCTGTTGGAGCAACCCTCAAGTGAGAGGAAAACATATTGGCTGAATGAGTCTTATGTTCCTTTGCATCTTGTAAAGAATTTTGAGGAAAAAAGAATTGTCCGCAAGTCCAATGATAAGAAACATGGAAAAATTCTTGAGATCGGTAGAGTAAAGAGGGCTCCTCAACAAAGGGGTTTTTCATATTTGTTTTCTAGAATGGAAAGATCTGAATATCATCAGTGTGGGCATTGCAACAAAGATGTCCCAATCAGGGAAGCTGTGAGCTGCATTTATTGCAAAGGACATTTCCACAAGAGGCATGCCAGGAAATCTGGTGGCACAAGAGCTGCTGAATGCACATATTCATGTCACAAATGCCAGGATGGGTTGCATGTGAAGACTAATACTAATAGAAGGAATGCTGACTCAAAACGGCAGAAGATTCAATCACAGAATGGTAAAAGTTCCCCTTTGGTTGGTAAATCAGTGAACCTTAAAGGCAACAAAAAGGCATCAAGTAAGGTGCCGCTGGTAATATCTCGAAATAATAAGAACATCCTACCAATTGTACCTCTTCGTCGTTCTACTAGGAAGGCCAAATCCTTATATCTGCACAAGCAAAAGATTGGAGGGCATAAAAAAGGAACACAAAGTAAAAAGAATGTAGGGCGTAAAAAAGGAAAGCAAGGTAAATCCAAGAAGGTGACTTCTCAAAGTTCCAAGGTAACTACTGGTCAACATAAAATGTTTGCAGCAACTCCGGCACGTAAGACAAGAACAAAACTTTTTAACTGTTACTGGCTTAAAGGTCTTCGGTTTTCTCAAAAGCCAAATGATGAACGTGTGATGCTTTTTAAAGAGAAAAAGCATATTATCTCTGATGTTCCTACTGGTGTGTTTGAATATCCTGAATGCCGCCTTCGCTGTGGAGATGTATCTACTTCAAATTATATTGCTTGTGAAATCTGTGAAGATTGGTTTCATGGGGATGCTTTTGGTCTCACTGTAGAGAATGCCAGACAACTTATTGGGTTTAGGTGCCATGCTTGTCGTGGTAGGATTGCTCCGATCTGTCCCCATGTAAAGAATAATGCTCCGTCTCCTGCTGACCCAATGCTGTAA 5112 0.4137 MEFVGKIVQKSVDGGGILTGTVKSHNSSSGLLEIVFEDGHCEEMEVSEVVSLLEIQPEVVKVKARVGREPKKRHRTSETTSCSGSGSDNLVAGSEISGILNGGDESSGGNDGDVVGNGNGSSGSDEKVGSENRFGFEEISNLNGGVSDINYNGICVKDGVDLNGSVNLNDNGIRVKDGVDLNARVNLNENEGVSDNDNGICVKDDIDLNARVNLNEDMDLNDVCDLNFDNEGGLERREGIDLNLDVNVDEGVNLDANLGGEMLRRECKFDLNVGVCEEVKEVQGCAEGNGHFVVDGETGQLREVGLDVEHRSMEVDGVRGDLDCVSDAVKSEEFRVSVENIAEDASLCFIEEKESHDGKENAAAIGSPMVLDGLSGENVAAIDSPMVLDGVSVRDCDYVSLEAGVAAVDECQDDPGSPCKQESSQRKRRKVSNNPKATPETALRRSSRRVSARKQVQVTDDPLSSLETSVTEEKPSMPGSEKYEQCNVPILKLQLPPSSQNLHLDDIPVLEFFSVYAYLTSFSTLLFLSPFELEDFVAALKSEIPSILLDNIHVSILHTLRKHLEFLSSEGCQSASICLRNLNWDFLDLVTWPMFMAEYLLIHSSEFKISFDANLSMFGTDYYKQPVNLKLEILQYLCDDMIETDTIRTEMNRRSLVIETGMGFDQNIYFDTGKKKRAAMDVSGGSCLTEEIVDDTTDLNSDECCLCKMDGNLICCDGCPAAFHSRCVGIAGDSLPEGDWYCPECAIGTHRASMKSRRSLRGADLLGTDPHGCLYFDSCGYLLVSNSSDAGSLCNYYHRNDIHVVIEVLRSMGALYGDLLMTICKHWDLPSDLNAEASSLAVFNRSSCKNMRMTAEYYATPTSLAPFTSSEPCMGKNLVDDHKKLKKNSTIDCCIQDGQDFPKGGNQLESTIESPGIASKGSADTSQLRSGIESIQMHRLYDSNRSIAVSSTAGNEDTSQASYGTDYINYYSLARVPSLVAQELMRKSPEKINKNIVMTEEDVVSDQTKSIMKKSSNFCWPSIQNLNAAAQMEKCGWCFSCKVANDGRDCLYISVVKPLDEVSKSTSVELQPRKIQNGHLRAIICHIFSLEVRLRGLLLGPWLNLHQTNLWHEDLLKTSDFLSVKRLLLLLESNLRHRALSADWLKHVDSVGTMGSATHIVVNLSRTSSKHGVGKKRARHSDIESSSSSKTTGGLVMYWSRGGRLSRKLFNWKVLPRSFVAKAARQAGFTKIPGILYPENSDFAKRSRCVAWRAAVEMSTSVEQLALQVRELYSNIRWHDIENSHPLHVLDKESKKSVRLFKKAIVRRKCTEGQSVKYLLDFGKRRGIPDVIVKHGSLLEQPSSERKTYWLNESYVPLHLVKNFEEKRIVRKSNDKKHGKILEIGRVKRAPQQRGFSYLFSRMERSEYHQCGHCNKDVPIREAVSCIYCKGHFHKRHARKSGGTRAAECTYSCHKCQDGLHVKTNTNRRNADSKRQKIQSQNGKSSPLVGKSVNLKGNKKASSKVPLVISRNNKNILPIVPLRRSTRKAKSLYLHKQKIGGHKKGTQSKKNVGRKKGKQGKSKKVTSQSSKVTTGQHKMFAATPARKTRTKLFNCYWLKGLRFSQKPNDERVMLFKEKKHIISDVPTGVFEYPECRLRCGDVSTSNYIACEICEDWFHGDAFGLTVENARQLIGFRCHACRGRIAPICPHVKNNAPSPADPML 1703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02608 1703 ProSitePatterns Zinc finger PHD-type signature. 704 745 IPR019786 -
Mepo2g02608 1703 PANTHER PHD FINGER FAMILY PROTEIN 2 1686 - -
Mepo2g02608 1703 SMART testlast3 506 566 IPR018501 -
Mepo2g02608 1703 Pfam PHD-finger 704 746 IPR019787 -
Mepo2g02608 1703 SMART PHD_3 1410 1457 IPR001965 -
Mepo2g02608 1703 SMART PHD_3 703 746 IPR001965 -
Mepo2g02608 1703 SMART PHD_3 1634 1681 IPR001965 -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 1563 1577 - -
Mepo2g02608 1703 ProSiteProfiles Zinc finger PHD-type profile. 701 748 IPR019787 -
Mepo2g02608 1703 CDD PHD1_AIRE 703 745 - -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 457 475 - -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 1533 1562 - -
Mepo2g02608 1703 Pfam DDT domain 510 562 IPR018501 -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 1533 1581 - -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 79 104 - -
Mepo2g02608 1703 ProSiteProfiles DDT domain profile. 506 566 IPR018501 -
Mepo2g02608 1703 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 695 762 IPR013083 -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 66 129 - -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 411 481 - -
Mepo2g02608 1703 SUPERFAMILY FYVE/PHD zinc finger 688 747 IPR011011 -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 1476 1505 - -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 1171 1191 - -
Mepo2g02608 1703 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1631 1686 IPR013083 -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 112 128 - -
Mepo2g02608 1703 MobiDBLite consensus disorder prediction 1464 1505 - -
Mepo2g02608 1703 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 620 652 IPR028942 -
Mepo2g02608 1703 SUPERFAMILY FYVE/PHD zinc finger 1637 1687 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02608 Mepo-Chr2 35770614 35787144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02608 1 1695 PHD Transcription Factor Family AT5G12400 39.150 0.0 1058
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mepo2g02608 DDT 8.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02608 - - mtr:11438137 3142.44