Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02599 ATGGCATCAATGGAAGACATCAATATGAGTATTGAGCAAATTACACTTCCAGGATTCAGATTTCACCCCACAGAAGAAGAACTCCTTGATTTCTATCTTAAAAATATGGTTGTTGGCAAAAAACTTCGTTATGATGTCATTGGTTTTCTCAATATCTATCATCATGATCCTTGTGACTTGCCAGGTTTGTCAAAGGTTGGGGAAAGAGAATGGTATTTTTTCGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGGCCTAACCGCACAACTGAGAAAGGTTTCTGGAAAGCCACTGGTTCGGACCGGAAAATCGTGACCTTATCGGATCCAAAACGCATAATTGGATTGAGGAAGACGTTGGTTTTCTATGAGGGAAGAGCTCCAAGAGGAACCAAGACTGATTGGGTTATGAATGAATACCGTTTACCTGACAATAGCCCCTTGCCTAAGGACATAGTATTGTGCAAGATTTATAGAAAGGCAACTTCCTTGAAAGTGCTTGAACAAAGAGCAGCAGAAGAAGAAGAGATGAAACAAATGGTGGGTTCTCCTACATCTTCCCCACCTTCTTCCTCTACGGACACAATCTCCTTTAACTACACACAACAAGACCAACACATGTCCATGCCCTTATTGTTCCAACAAGTCATTCCTAAGAAAGAATCTGAACATGAAATAATTAAAACTGAAGATATGGTTTCTTTGTCAAGTCATGAAAAAATTGTGAAAGATAACAAAAAAGCTTGTGGAACATCTTTGCAATTGCCCTTAGGGAAGGACAATGTACCTGAGCTTCAGTTACCTATAGCTGCAGATTGGACCCAAGATACGTTTTGGGCTCAGTTTAATAGTCCTTGGCAACAAAACTGGAGTGCTACACTAATATCCTCAATTTTTAATTAA 906 0.3974 MASMEDINMSIEQITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPCDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGTKTDWVMNEYRLPDNSPLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMVGSPTSSPPSSSTDTISFNYTQQDQHMSMPLLFQQVIPKKESEHEIIKTEDMVSLSSHEKIVKDNKKACGTSLQLPLGKDNVPELQLPIAADWTQDTFWAQFNSPWQQNWSATLISSIFN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02599 301 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 220 - -
Mepo2g02599 301 SUPERFAMILY NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Mepo2g02599 301 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Mepo2g02599 301 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Mepo2g02599 301 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Mepo2g02599 301 FunFam NAC domain-containing protein 67-like 24 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02599 Mepo-Chr2 35659774 35662375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02599 14 290 NAC Transcription Factor Family AT2G17040 60.791 3.16e-111 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g02599 NAM 8.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02599 - - gmx:100816770 445.662