Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02593 ATGGAAGCTTTGTTCCTTACCAAACCAATTTCTCACTTCAAACCCAAACACTCTCTAACTCCCAAACACCCATTTGAATTTCTCTCCCACCACCATCAATCTCTCACTCTCCACCACAAACCCACCAAACTCTCCACCGTCACCGCCGCAACCCAAAACCAACAACAACAAGAACAAACAACACCCAAAAACATCGAAGATGAAGAATCCTACGGCGAAGTCAAAAAAATCATCGGAAGCAAAGCCTTGGAAGACTCCACCGGCATGGAGTATCTCATAGAATGGAAAGACGGCCATGAACCTTCCTGGGTACCCGCTGACTTCATAGCAAAAGACGTCGTCGCTGAATACGAAACTCCCTGGTGGACCGCCGCTAGAAAATCCGACGAAAATGCCCTTAAAACAATCCTTGAAGCCGACGATTTCCGCGACGTAAATGCAGTAGACTCCGACGGTAGAACCGCACTTCTATTTGTCGCTGGCCTTGGCTCAGAGCCCTGCGTTAAGCTCTTAGCCGAAGCCGGCGCCAATTTAGACCACCGCGATAATAGCGGTGGTCTATCTGCGATGCACATGGCAGCTGGATATGTAAGACCTGGAGTAGCAAAACTGCTACTCGAGCTCGGTGCTGATCCAGAAATCAGCGACGATCGTGGAAGAACAGCGTTGGATTTAGTGAGGGAGTTGTTAAAAGCGACGCCAAAGGGGAATCCAATGCAATTCGGAAGAAGAATGGGGTTAGAAGGTGTGGTTAGGGTTTTAGAAGGTGCAGTATTTGAATATGCTGAGGTAGAGGAAATATTGGAGAAGAGAGGGAAGGGTGAGAATTTGGAGTATTTGGTGAAATGGAAAGATGGAAGTGCTAATGAGTGGATTAAGGGGAGGTATGTGGCGGAGGATTTGGTGAGGGATTATGAGGCAGGGCTTGAATATGCGGTGGCGGAAGCGGTGGTTGGTCGGAGAGTTGGGGATGATGGGAAGTATGAGTTTTTGGTGAAATGGGTTGATTTGGAAGAACCCACTTGGGAGCCTGAGGAGAATGTTGATTCTGAGCTTGTTAAGGTGTTTGATTTGAGTAATAATCAAGCTCAGTCTGGTAATGATAATGGGGTTTCTACGGTTAAATTGAGCCAGGATAGTTCAAATATTGTTAGTGCATGA 1161 0.4711 MEALFLTKPISHFKPKHSLTPKHPFEFLSHHHQSLTLHHKPTKLSTVTAATQNQQQQEQTTPKNIEDEESYGEVKKIIGSKALEDSTGMEYLIEWKDGHEPSWVPADFIAKDVVAEYETPWWTAARKSDENALKTILEADDFRDVNAVDSDGRTALLFVAGLGSEPCVKLLAEAGANLDHRDNSGGLSAMHMAAGYVRPGVAKLLLELGADPEISDDRGRTALDLVRELLKATPKGNPMQFGRRMGLEGVVRVLEGAVFEYAEVEEILEKRGKGENLEYLVKWKDGSANEWIKGRYVAEDLVRDYEAGLEYAVAEAVVGRRVGDDGKYEFLVKWVDLEEPTWEPEENVDSELVKVFDLSNNQAQSGNDNGVSTVKLSQDSSNIVSA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02593 386 CDD CD3_cpSRP43_like 309 358 IPR030300 -
Mepo2g02593 386 Gene3D - 116 257 IPR036770 -
Mepo2g02593 386 SUPERFAMILY Ankyrin repeat 116 227 IPR036770 -
Mepo2g02593 386 SMART ANK_2a 116 147 IPR002110 GO:0005515
Mepo2g02593 386 SMART ANK_2a 185 214 IPR002110 GO:0005515
Mepo2g02593 386 SMART ANK_2a 151 180 IPR002110 GO:0005515
Mepo2g02593 386 Pfam Ankyrin repeats (many copies) 171 225 IPR002110 GO:0005515
Mepo2g02593 386 ProSiteProfiles Ankyrin repeat region circular profile. 185 217 - -
Mepo2g02593 386 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Mepo2g02593 386 Pfam Chromo (CHRromatin Organisation MOdifier) domain 314 354 IPR023780 -
Mepo2g02593 386 SUPERFAMILY Chromo domain-like 314 356 IPR016197 -
Mepo2g02593 386 Gene3D - 68 115 - -
Mepo2g02593 386 Gene3D - 258 307 - -
Mepo2g02593 386 SMART chromo_7 311 361 IPR000953 -
Mepo2g02593 386 SMART chromo_7 260 310 IPR000953 -
Mepo2g02593 386 SMART chromo_7 70 122 IPR000953 -
Mepo2g02593 386 SUPERFAMILY Chromo domain-like 260 307 IPR016197 -
Mepo2g02593 386 SUPERFAMILY Chromo domain-like 67 121 IPR016197 -
Mepo2g02593 386 PANTHER MYOTROPHIN 52 226 - -
Mepo2g02593 386 MobiDBLite consensus disorder prediction 47 61 - -
Mepo2g02593 386 ProSiteProfiles Ankyrin repeat region circular profile. 151 183 - -
Mepo2g02593 386 MobiDBLite consensus disorder prediction 362 386 - -
Mepo2g02593 386 ProSiteProfiles Chromo and chromo shadow domain profile. 262 291 IPR000953 -
Mepo2g02593 386 ProSiteProfiles Chromo and chromo shadow domain profile. 312 348 IPR000953 -
Mepo2g02593 386 MobiDBLite consensus disorder prediction 47 70 - -
Mepo2g02593 386 Gene3D - 308 358 - -
Mepo2g02593 386 ProSiteProfiles Ankyrin repeat profile. 185 217 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02593 146 225 CAMTA Transcription Factor Family AT5G09410 39.773 5.50e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02593 K12271 - gmx:100818382 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02593 2 35591216 35592376 Mepo2g02593 2 35591216 35592376 ECH