LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g02586	ATGTCTGTTCAGACTTGCGATAGAATTTGTTTGGCGCCCAAAAACCCTTTAAAAGGTAAGTTTGGGACCTCTATTGGAGCACATGAGATTTTCAACCCAGAGACATGGAAGGCAGCTTTGACAGAACTAGTGGCAACAGCCTCTCTGATGTTCACCTTGACTAGCTCCATTATTGCATGCTTGGACTCACACGAAGTTGATCCTAAGCTTATTGTTCCCTTTGCAGTCTTCATCATAGCCTTCTTATTCTTAATTGTGACAGTTCCTCTATCTGGTGGCCACATGAGTCCTGTTTTCACATTCATAGCTGCTCTAAAAGGTGTTGTCACTCTTTCTCGTGCAGTCCTTTACGTCTCAGCACAATGCATTGGCTCCATAATTGGCTTCTATATACTAAAGTGTGTAATGGATCCAAAATTAATAAATACATATTCATTGGGAGGTTGTGCTATTGGTGGCAAAGGACTCAATCAGCATGATGCTTTGTTGTTGGAATTCTCTTGCACATTTTTGGTACTCTTTTTGGGTGTCACATTAGCTTTTGACAAAAAGAGGTCAAAGAATTTGGGGTTGACAATGGTATGCTTGGTGGTAGCTGGTGCCATGGCATTGGCAGTTTTTGTGTCAATAACTGTAACGGGCCAGGCCGGCTATGCTGGTGTTGGGTTAAACCCGGCAAGATGCTTAGGCGCTGCGTTGATTCATGGAGGCTCATTATGGAATGGTCATTGGGTTTTCTGGGTTGGTCCTATCTTGGCCTGCTTAATCTATTATAGTGTCTCTATCAATCTACCAAAAGAGGGTTTGGTTTGGGTGGATGGAGAATATGATGTCTTAAAGTTGGCTCTTGGTTCTTGTGGGACTATTCATAATGGTAATGTTTCAGATGATATCACAATAGAAGGAAGCAGAGCTGGCTTTCAAGAAGTCTTCATCATAGTCTTCTTGTTCCTAATTGCCACAGTTCCTCCAAATGGTGGCCACATGTGTCCTGTTTTCACATTCATAGCTGCTCTAAAAGGTGTTGTCACTCTTTCTCGTGCACTCCTCTACGTCTTAGCACAATGCATTGGCTCAATAATTGGTTTCTTTATACTCAAATGTGTAATGGAGCCGAAGTTAATAGATGAATATTCCCTAGGAGGTTGTACCCTTGGTGACAAAGGACAAAGTTCTTCTAGTATAATAAAGCCACAAGATGCATTGTTGGTTGAATTCTCTTGGGACATTTCTGGTACTCTTTGTTGGCCTCACAAGTGTTGGGATGAACCCAGCAAGCTGCTTACTTCATCGAATGGGCATTGGGTTTTTTGGATGGCCTGCTTAGTCTATTATGGTGTCTCTGTTAATCTATCTAAGGAGGGTTTGGTTCGGGTTGATGGAGAATATGATATCTTAAGGTTGGCTATGGGTTGTGGGACTGTCTCTGCTAGTGCTGTCTGA	1443	0.4241	MSVQTCDRICLAPKNPLKGKFGTSIGAHEIFNPETWKAALTELVATASLMFTLTSSIIACLDSHEVDPKLIVPFAVFIIAFLFLIVTVPLSGGHMSPVFTFIAALKGVVTLSRAVLYVSAQCIGSIIGFYILKCVMDPKLINTYSLGGCAIGGKGLNQHDALLLEFSCTFLVLFLGVTLAFDKKRSKNLGLTMVCLVVAGAMALAVFVSITVTGQAGYAGVGLNPARCLGAALIHGGSLWNGHWVFWVGPILACLIYYSVSINLPKEGLVWVDGEYDVLKLALGSCGTIHNGNVSDDITIEGSRAGFQEVFIIVFLFLIATVPPNGGHMCPVFTFIAALKGVVTLSRALLYVLAQCIGSIIGFFILKCVMEPKLIDEYSLGGCTLGDKGQSSSSIIKPQDALLVEFSWDISGTLCWPHKCWDEPSKLLTSSNGHWVFWMACLVYYGVSVNLSKEGLVRVDGEYDILRLAMGCGTVSASAV	480

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g02586	480	Gene3D	Glycerol uptake facilitator protein.	279	416	IPR023271	-
	Mepo2g02586	480	Pfam	Major intrinsic protein	314	373	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mepo2g02586	480	Pfam	Major intrinsic protein	33	253	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mepo2g02586	480	PRINTS	Major intrinsic protein family signature	37	56	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mepo2g02586	480	PRINTS	Major intrinsic protein family signature	113	132	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mepo2g02586	480	PRINTS	Major intrinsic protein family signature	205	227	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mepo2g02586	480	PRINTS	Major intrinsic protein family signature	244	264	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mepo2g02586	480	PRINTS	Major intrinsic protein family signature	76	100	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mepo2g02586	480	Gene3D	Glycerol uptake facilitator protein.	24	264	IPR023271	-
	Mepo2g02586	480	SUPERFAMILY	Aquaporin-like	33	256	IPR023271	-
	Mepo2g02586	480	SUPERFAMILY	Aquaporin-like	311	378	IPR023271	-
	Mepo2g02586	480	PANTHER	AQUAPORIN-LIKE	14	284	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g02586	Mepo-Chr2	35528223	35531723	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g02586	27	256	Major Intrinsic Protein MIP	AT2G37180	31.148	1.32e-20	90.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g02586	K09866		-	gmx:100804160	478.018

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo2g02586	2	35528223	35531723	Mepo2g02586	2	35528223	35531723	ECH