Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02578 ATGGAAATTACACCTGCTAGAAAGACACAGAAGGCTGACCGAGAAAAGTTAAGGAGGGATCGACTCAATGAACAGTTTTTAGAGCTGGGTAACATTTTAGACCCTGATAGGCCTAAAAATGATAAAGCGACCATTCTAGGAGATACAGTTCAATTGCTGAAGGACCTTACTTCTCAAGTTAGTAAACTAAAAGATGAATATACTATGCTAAATGAAGAATCTCGTGAGTTGTCTCAGGAGAAAAACGATCTCAGAGAAGAAAAGGCTTCTCTTAAATCAGATATTGAGAACTTGAATAATCAGTATCAGCTGCAACTAAGGACTATGTATCCATGGCCTGCAATGGATCATTCCGTTATGATGGCCCCACCATCATATCCGTATCCAGTTCCAATGCCGGTTCCTGCTGGTTCAATTCCCATGCAGCCGTACCCCTACTATGCTAATCAACACCCTGCAGTCATCCCTAACCCTTGTTCAACATATGTTCCCTTTTTAGCCCCAAATACAATTGTTGAACAACAATCCACTCAGTATGTATCCCCGCCTCTTCATCCAGGTAGCCGGTCCCACGTATCAGGGAAACAAGACTCCAAAAACAAATCATCCAGGGAGAGCAAGGCTCAAAGAAACGAGGATTCCAATGATGTAGCCACGGACCTTGAGTTGAAGACTCCTGGGTCTTCCGCAGATCAGGATTTAACATCCGCACAAAAAAAATCTAGTAAGTCGTCGAGGAAGGAAACCAGTTTCACAGAAGGTAGTTCGTTAGGCAAGTGTTCTTCATCTCACAGTGTTCAGGATAGCTCATCAAGTAGTGTAGTGGGGAGCAGAAAGGCTAGTGAATGA 849 0.4323 MEITPARKTQKADREKLRRDRLNEQFLELGNILDPDRPKNDKATILGDTVQLLKDLTSQVSKLKDEYTMLNEESRELSQEKNDLREEKASLKSDIENLNNQYQLQLRTMYPWPAMDHSVMMAPPSYPYPVPMPVPAGSIPMQPYPYYANQHPAVIPNPCSTYVPFLAPNTIVEQQSTQYVSPPLHPGSRSHVSGKQDSKNKSSRESKAQRNEDSNDVATDLELKTPGSSADQDLTSAQKKSSKSSRKETSFTEGSSLGKCSSSHSVQDSSSSSVVGSRKASE 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02578 282 MobiDBLite consensus disorder prediction 221 239 - -
Mepo2g02578 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Mepo2g02578 282 Gene3D - 6 89 IPR036638 GO:0046983
Mepo2g02578 282 PANTHER TRANSCRIPTION FACTOR BHLH121 2 280 IPR044579 GO:0003700|GO:0006879
Mepo2g02578 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 76 IPR036638 GO:0046983
Mepo2g02578 282 CDD bHLH_AtILR3_like 11 85 - -
Mepo2g02578 282 MobiDBLite consensus disorder prediction 248 282 - -
Mepo2g02578 282 MobiDBLite consensus disorder prediction 177 282 - -
Mepo2g02578 282 MobiDBLite consensus disorder prediction 192 219 - -
Mepo2g02578 282 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Mepo2g02578 282 Coils Coil 53 108 - -
Mepo2g02578 282 SMART finulus 12 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02578 Mepo-Chr2 35476516 35479099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02578 6 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 63.158 2.64e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g02578 HLH 4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02578 - - cam:101491902 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02578 2 35476516 35479099 Mepo2g02578 2 35476516 35479099 ECH