Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02559 ATGGGTTTAGGTTCAATTATAAATTTTAATGTTGTTATTCTTCTTCTATATGTTTGTTGGACCAAACAAGCTTTTGGTGTGACAGAACAAGAAGAGGATAGAGTGTATGGACTACCTGGGCAGCCTCCAGTGAATTTCAAACAATATGCTGGTTACATAAATGTTAATGAAAGTCATGGAAGAGCACTGTTTTATTGGTTTTTTGAATCTGTTGATCAACCTCAAACAAAACCTCTTCTCCTTTGGCTTAATGGAGGCCCAGGTTGTTCTTCAATTGGCTATGGAGAAGCAGAGGAACTTGGACCCTTTTTCCCCCAAAATAGCAGCCAACCTAAGCTCAAGTTGAACCCATATTCTTGGAATAAAGCTGCAAATCTTTTGTTTCTTGAATCCCCTGCTGGAGTGGGTTTTTCCTACACCAACACCACCAGTGATATAAGTGAACTTGGTGACACCATTACTGCTAAGGATTCACACACATTCCTCATAAATTGGTTTAAAAGATTTCCTCAATTCAAATCACATGATTTCTACATTGCTGGTGAAAGCTATGCAGGACATTATGTTCCACAACTTTCTGAGCTCATTTTGGATAACAATCACAATTCTTCCCAGGAAGATTACATTAACTTCAAAGGGATCATGATTGGAAATGCTTTATTAGATGATGAAACAGATCAAAAAGGTATGATAGAGTTTGCATGGGACCATGCTGTCATATCTGATGGTCTATACCATAACATCACAACCATATGCAACTTCAGCCATCCAATTCAAAATCAAACAGATGAATGCAATACAGAACTTAATAAATACTTTGATGTGTATAAGATTATAGACATGTATAGCTTGTACACTCCCATGTGTTTCAGCAATATCAGCAATGTTAGAAGGGAAGCCCCTCATTCTTTTTCCAAATTGGACGGGTGGCATAAAAATCTAGCAGGATATGATCCATGTGCATCAGATTATACTGCAGCATACCTAAATAGGCCAGAGGTTCAAAAGGCACTTCATGCTAATGTCACAAAAATTCCTTATCCATGGAGCCACTGCAGTAATAATATAACATTTTGGAATGATGCACCTGTGTCCATGCTTCCTGTCCTCAAGAAGATTATTGCTGGTGGTATTCGTATATGGGTTTACAGTGGAGATACAGATGGAAGAATTCCAGTAACTGCAACAAGATACACATTAAGAAAATTGGGACTCCCTATTGTTCAAGATTGGACTCCTTGGTATACTAGTCGCCAGGTGGGAGGATGGAACATTGTATACGACGGACTAACATTTGTGACCATAAGAGGTGCTGGTCATCAAGTTCCTACTTTTACTCCCAAGCAAGCTCTTCAGCTAGTTCGACACTTCTTAGTCAATAAGAAATTACCACAACATCCTATTTAA 1407 0.3845 MGLGSIINFNVVILLLYVCWTKQAFGVTEQEEDRVYGLPGQPPVNFKQYAGYINVNESHGRALFYWFFESVDQPQTKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPAGVGFSYTNTTSDISELGDTITAKDSHTFLINWFKRFPQFKSHDFYIAGESYAGHYVPQLSELILDNNHNSSQEDYINFKGIMIGNALLDDETDQKGMIEFAWDHAVISDGLYHNITTICNFSHPIQNQTDECNTELNKYFDVYKIIDMYSLYTPMCFSNISNVRREAPHSFSKLDGWHKNLAGYDPCASDYTAAYLNRPEVQKALHANVTKIPYPWSHCSNNITFWNDAPVSMLPVLKKIIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLPIVQDWTPWYTSRQVGGWNIVYDGLTFVTIRGAGHQVPTFTPKQALQLVRHFLVNKKLPQHPI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02559 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 447 IPR001563 GO:0004185|GO:0006508
Mepo2g02559 468 FunFam Carboxypeptidase 29 291 - -
Mepo2g02559 468 FunFam Carboxypeptidase 366 460 - -
Mepo2g02559 468 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Mepo2g02559 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Mepo2g02559 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mepo2g02559 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mepo2g02559 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Mepo2g02559 468 Gene3D - 320 356 - -
Mepo2g02559 468 Gene3D - 366 459 - -
Mepo2g02559 468 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Mepo2g02559 468 Pfam Serine carboxypeptidase 39 459 IPR001563 GO:0004185|GO:0006508
Mepo2g02559 468 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
Mepo2g02559 468 SUPERFAMILY alpha/beta-Hydrolases 31 465 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02559 Mepo-Chr2 35268909 35275379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02559 328 463 Calmodulin-binding Proteins AT2G22960 29.927 1.09e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02559 K16297 - gmx:100781503 831.247