LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g02556	ATGAATGTCATAAGAACTAGAAAAAAAGAACTATCTTTGGAAGTTGATGAAAAGAAACAAAGATCAGATTTGTTAACTGTTTTTATGAAGATGAAGGATGAGAATGGAAGTGCTTATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTTATACTAGCTGGGAGAGACACTTCTTCTGTGGCTTTGAGTTGGTTTTTTTGGTTACTTGATCAGAATCATGAAGTGGAGGAGAAGATATTAGAAGAGATATGCAAGGTGGTGAGTCAGAGGAATGATATAAAGAAGGAAGAATTTGAAAATTCCTTGATACTTAGGCCTGAAGAGATTAAAAAGATGGACTATTTGCATGCTTGTTTATCTGAAACTCTCAGATTATACCCTTCTGTTCCTGTTGATCACAAGGAGGTAGTTGAGGATGATACATTCCCAGATGGAACAATACTAAAAAAAGGTACAAAAGTGATCTATGCAATTTATGCAATGGGAAGAATGGAAAGCATATGGGGAAAAGACTGCAGGGAGTTTAAACCAGAAAGATGGTTGAAAGATGGTCGTTTTATGAGTGAATCTGCGTACAAATTCACAGCATTCAATGGTGGACCTCGGTTATGTTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGTTGCTGCTAGTATCATATACAGATATCATGTGAAGGTGGTGGAGAATCACCCTGTGGAGCCAAAGATTGCTTTAACTATGTATATGAAGCATGGAATCAAAGTTAACCTCTATAGGAGGGATGCAGCTGAAATTCAAAAACACTTGGATTTGATCATTGGTTAA	816	0.3591	MNVIRTRKKELSLEVDEKKQRSDLLTVFMKMKDENGSAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNHEVEEKILEEICKVVSQRNDIKKEEFENSLILRPEEIKKMDYLHACLSETLRLYPSVPVDHKEVVEDDTFPDGTILKKGTKVIYAIYAMGRMESIWGKDCREFKPERWLKDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYHVKVVENHPVEPKIALTMYMKHGIKVNLYRRDAAEIQKHLDLIIG	271

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g02556	271	Pfam	Cytochrome P450	2	242	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo2g02556	271	Coils	Coil	1	21	-	-
	Mepo2g02556	271	SUPERFAMILY	Cytochrome P450	3	257	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo2g02556	271	PANTHER	CYTOCHROME P450	2	251	-	-
	Mepo2g02556	271	PRINTS	E-class P450 group I signature	43	60	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo2g02556	271	PRINTS	E-class P450 group I signature	195	205	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo2g02556	271	PRINTS	E-class P450 group I signature	63	89	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo2g02556	271	PRINTS	E-class P450 group I signature	205	228	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo2g02556	271	PRINTS	E-class P450 group I signature	117	135	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mepo2g02556	271	Gene3D	Cytochrome P450	1	257	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g02556	Mepo-Chr2	35249428	35251115	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g02556	3	265	Cytochrome P450	AT5G23190	75.188	3.04e-144	414

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g02556	K15402		-	gmx:100809503	489.189

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