Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02528 ATGATTTTGGACAAGAAAAACATTGAGGAGACTCATTACAAGGTTCTCAATGTCAAGGAGGATGCAAATTACGAAGAAATTCGTGCTAGTTACCGAAGTGCTGCACTAAGTTTACATCCTGATAAGCTATTGAAGACATCTGATGCATCCAGCAGTAACCAAACAACTTCAGAGAGATTTCTCAAAGTTCACAAGGCATGGGAAATTCTAAGTGATTCAACCTCTCGTTTAATTTATGACAAGGAGCTGAAAAGTTCAAGGCGGGAGGATTTTTTGGCTTCTGAAGTTGCAGAAGATTTAAGGTTACAGGATATGACAGTTGAAGATGCTGGTGAAACATTGGAATTGTTTTATCAATGTCGATGTGGTGATTACTTTTCTGTGGACTCATTGGAATTGCAGAGGATGGGGTATTCCTTGCTGAGAGATGAAAACAGCATCAGCATTTCTATACTTAATGTTGATACTTTACCAGGATCAGTGATTCTTCCTTGTGGATCTTGTTCGTTGAAAGCTCATCTTGTACTCGGTATGGGATGA 540 0.3907 MILDKKNIEETHYKVLNVKEDANYEEIRASYRSAALSLHPDKLLKTSDASSSNQTTSERFLKVHKAWEILSDSTSRLIYDKELKSSRREDFLASEVAEDLRLQDMTVEDAGETLELFYQCRCGDYFSVDSLELQRMGYSLLRDENSISISILNVDTLPGSVILPCGSCSLKAHLVLGMG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02528 179 Gene3D DnaJ domain 2 88 IPR036869 -
Mepo2g02528 179 PRINTS DnaJ domain signature 31 46 IPR001623 -
Mepo2g02528 179 PRINTS DnaJ domain signature 55 75 IPR001623 -
Mepo2g02528 179 PRINTS DnaJ domain signature 13 31 IPR001623 -
Mepo2g02528 179 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Mepo2g02528 179 FunFam DNAJ heat shock N-terminal domain-containing protein-like 90 179 - -
Mepo2g02528 179 SMART dnaj_3 10 75 IPR001623 -
Mepo2g02528 179 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Mepo2g02528 179 PANTHER DPH3 HOMOLOG-RELATED 11 175 IPR044248 GO:0017183|GO:0046872
Mepo2g02528 179 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 96 177 IPR007872 -
Mepo2g02528 179 Gene3D DPH Zinc finger 90 178 IPR036671 -
Mepo2g02528 179 Pfam DnaJ domain 11 80 IPR001623 -
Mepo2g02528 179 SUPERFAMILY CSL zinc finger 97 176 IPR036671 -
Mepo2g02528 179 CDD DnaJ 11 72 IPR001623 -
Mepo2g02528 179 Pfam CSL zinc finger 100 175 IPR007872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02528 Mepo-Chr2 34955066 34955605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02528 12 80 C2H2 Transcription Factor Family AT1G74250 42.029 1.30e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02528 K17867 - gmx:100814856 266.929