Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02527 ATGGACGTTGATAAAACTGAAAACACCGGACCCATGTCGTTTTCAGATCTCGGACTCTCGGAATGGATGGTGAAGAGTTTAGAGAAATTCTGGATACAAACTCCGCGGCGCGTGCAACAACACTGCATCCCAAAGATTCTAGAAGGCCGTCATGTAATTGGAATTGATGAGACTGGTAGTGGTAAAACGGCAGCCTTTGCGCTTCCTATTCTCCAACGCCTCGGGGAAGCTCCTTTCGGTGTGTTTGCTCTCGTACTGACACCCACTCGTGAGCTTGCGGTTCAGCTGGCTCACCAGTTTTGGATCCTTGGGTATTCGCTCCACCTCACCCTTACGGTGGTTGTGGGTGGTTTAGACATTGGTAGCCAGGTAAAAAGATTGGTCACCAGGCCTCACATTGTTATCGCCACTCCCCAGAGGCTCAAGGTTTTGCTTGAGGATAATCCTGAAATCGCTCAAATTTTCGCCAATACTAAGTTTCTTGTATTGGATGAAGCAGACCAACTCGTGGATGGTGGTTTTGAGGAGGAGTTGAAATTTATCTTTCGGTGCTTACCAGAAAACCGGCAAAACCTCTTCTTTTCAGCAACCATGACTAGTAATCTGCAAAATTTGTGTGAATGTTATCAAGATAAGCTGTATGCCTTCGAGGCTCCGGAAGGGTGGCGCCAACTGTTTCCAATTCTCTTGCACTTCCCTTCTCACTTTGTTTTGTTACGTGGCGTTCACGATTATAACACTGCAATACAATGGACGTTGAAATCCCCGATAAGCGCTGAAAACACCAAACACATGTCGTTTTCAGATCTCCGACTCTCGGAATGGATGATGAGATTAGAGAAATTATGGATACGAACTCCGCAACAACACTGCATCCCTAAGGCTCGGTTTGGATTGATGGAAGAGAGCGGAACAGAGCGGAATTTAAATGAACGGAATGGAATGGAACCGAATGGAATATATATTCCATTCCAGTGTTTGGATATTTTACAATGTAACAGAACAAGGTTTCCACTCCATTGTTTGGATAGTGGATGGAATAAAGTAAAACAATTGGAAGCTAGGCCTCAACTTGTTATCGCCACTCCCAAGACGCTCATGCTTTTGCTTCACGAGAATCCTGAACTCGCTCATATTTTTGCTACTATTCTTGAATTGTATGATCAATTTCTTGTCTTGGATAAAGCTGACCAACTCATGGATGGTGGTTTTCAAGAGGAAATGAATTTTATCTTTCAGTGCTTACCAGAAAACCGCCAAAACCTCTTCTTTTCAGCAACCATGACTAGTAATCTGCAACACTAA 1305 0.4406 MDVDKTENTGPMSFSDLGLSEWMVKSLEKFWIQTPRRVQQHCIPKILEGRHVIGIDETGSGKTAAFALPILQRLGEAPFGVFALVLTPTRELAVQLAHQFWILGYSLHLTLTVVVGGLDIGSQVKRLVTRPHIVIATPQRLKVLLEDNPEIAQIFANTKFLVLDEADQLVDGGFEEELKFIFRCLPENRQNLFFSATMTSNLQNLCECYQDKLYAFEAPEGWRQLFPILLHFPSHFVLLRGVHDYNTAIQWTLKSPISAENTKHMSFSDLRLSEWMMRLEKLWIRTPQQHCIPKARFGLMEESGTERNLNERNGMEPNGIYIPFQCLDILQCNRTRFPLHCLDSGWNKVKQLEARPQLVIATPKTLMLLLHENPELAHIFATILELYDQFLVLDKADQLMDGGFQEEMNFIFQCLPENRQNLFFSATMTSNLQH 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02527 434 Gene3D - 330 434 IPR027417 -
Mepo2g02527 434 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 43 216 IPR014001 -
Mepo2g02527 434 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 12 40 IPR014014 GO:0003724
Mepo2g02527 434 Pfam DEAD/DEAH box helicase 37 204 IPR011545 GO:0003676|GO:0005524
Mepo2g02527 434 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 349 433 - -
Mepo2g02527 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 432 IPR027417 -
Mepo2g02527 434 Pfam DEAD/DEAH box helicase 347 433 IPR011545 GO:0003676|GO:0005524
Mepo2g02527 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 210 IPR027417 -
Mepo2g02527 434 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 350 434 IPR014001 -
Mepo2g02527 434 SMART ultradead3 31 231 IPR014001 -
Mepo2g02527 434 Gene3D - 3 214 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02527 Mepo-Chr2 34943106 34947288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02527 1 198 Eukaryotic Initiation Factors Gene Family AT3G19760 30.882 6.04e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02527 K14778 - gmx:100798597 284.648