Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02505 ATGGACACGCCTAAACTATATGCTAACAAGTTCGACGTAGGGATATGGTTATACTCATCTGACACGAGCTCTCTTCAAAACCCTAGATCAGAAGGAGATCGTAATCACATGCAGGTGAACACGACAGATCAAAAGAAGAGGAAGAGAATGCAATCCAGCAGAGAATCAGCACAAAGATTAAGGATGAAGAAGCTGCAACACATGGAATATCTAAGCAACCAAATTGAACAGCTGAGAAAATAG 243 0.4115 MDTPKLYANKFDVGIWLYSSDTSSLQNPRSEGDRNHMQVNTTDQKKRKRMQSSRESAQRLRMKKLQHMEYLSNQIEQLRK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02505 80 CDD bZIP_plant_GBF1 46 80 IPR045314 GO:0003700|GO:0006355
Mepo2g02505 80 SUPERFAMILY Leucine zipper domain 45 79 IPR046347 GO:0003700|GO:0006355
Mepo2g02505 80 MobiDBLite consensus disorder prediction 36 64 - -
Mepo2g02505 80 MobiDBLite consensus disorder prediction 22 64 - -
Mepo2g02505 80 PANTHER BZIP TRANSCRIPTION FACTOR 44 24 80 - -
Mepo2g02505 80 Gene3D - 43 80 - -
Mepo2g02505 80 Pfam Basic region leucine zipper 42 80 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02505 Mepo-Chr2 34803043 34804195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02505 19 80 bZIP Transcription Factor Family AT1G75390 46.774 3.14e-09 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo2g02505 bZIP_2 6.3e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02505 K25786 - gmx:778139 70.4774