Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02500 ATGGCATCTTCTTTCGTGAAGCTTGATGATTCTCCAATGTTCCAGAAACAGTTATTTTCTATTGAAGAAACGGCTGATGAGTTAAAGGATCGGTGCCAGAATCTATTCAAAGGGTGTAAGAAATTTATGACAGCTATAGGGGAAGCATATAATGGAGAACTTGCCTTTGCTGATTCATTAGAAGCATTTGGAGGTGGCCAGGACGATCCTGTTAGTGTATCAATTGGAGGACCCGTCATATCCAAGTTTATCACTGCACTACGTGAATTAGCTACTTTTAAAGAGCTTCTTCGCTCACAGGTAGAGCATGTATTGGTTGACCGGTTGACAGAGTTTATAAATGTTGATTTGCAAGATGCTAAGGAATCTCGCCGCCGTTTTGACAAATCTGTGCATTCTTACGATCAGTCACGAGAAAAATTTGTTTCTTTGAAGAAGAATACACCGGAAGATATTGTTGCTGAATTAGAAGAGGGTCTACAAAATTCGAAGTCATCATTTGAGAAAAGCCGCTTCAATCTAGTACACTCTCTCATGAATATTGAAGTGAAAAAGAAGTACGAGTTCTTGGAATCCATAAGTGCAATAATGGATGCCCATCTGAGATACTTTAAACTGGGATACGACTTACTGAGCCAAATGGAGCCTTATATTCACCAGGTGCTAACATATGCTCAACAATCTAAAGAACAAGCTAATATTGAGCAAGATAAGCTTGCAAAACGGATACAAGAATACAGAACACAGGCAGAGATGGAAAACATACGAGCTTCTAGCAGCAATACTCAACCTATGTCAGGTGCTGATGGCTCCCGTCCTTTAGGTTTGAAACCTTACAAAAGCTTTGAAGCAGGGATGCAGTCTGCAACCAAAGGCGAGATTCAAACAGTTAAACAAGGCTATCTGTTAAAACGATCATCAAGGATGCGAGGGGATTGGAAAAGGAGGTTTTTTGTACTTGATAACCATGGGAGTTTATATTATTACAGATCAAAAGGACCCAAACCCGCGGGATTTCAGTCATATAATTATAGTCGTTCTTCTGAACAAAATAGTGGCATGTTTGGTAGATTCCGTTCAAGGCATAACAGGGCAGTGTCACTAAATGAGGATATTTTGGGTTGTTGTGCAGTCGATCTGTGCACATCCACCATAAAGATGGATGCAGAGGATACAGATCTACGGCTTTGCTTCCGTATTATTTCTCCGTCAAAAACATATACGCTGCAGGCTGAAAACGAAGCTGATAGGATGGACTGGGTAAACAAAATTACTGGAGCTATCACCTCGCTTTTTAATTTTCAGTTTCTTCAACAGCCACATTATGGTAAATTGCATTCAGAAAATAAAAACTCAGCGACTGGTTCTTCTTTGACAAGTCAACAAGAGGATAGTAATAAATCTTTGATGGACAATGCATTTTCCGAAGAAGCGGGTAGTGTCTCTAATATTTTAAGGGGAGTTCCTGGGAATGATAAATGTGCTGAGTGCAGTGCTCCTGAACCAGACTGGGCATCTTTAAACCTTGGTATACTGTTGTGCATTGAATGCTCCGGAGTGCATCGCAATCTTGGAGTTCATATCTCAAAGGTGAGATCTATAACATTAGATGTGAAGGTTTGGGAACCTACCATTTTGGAGTTATTCAATAATTTAGGTAATACTTATTGTAATTCTATTTGGGAGGGCTTGCTTCTACATCATGATGAAAGAGTGGGGGAATCAAACGTGCCTTCGAAACCATGCTCCACAGATCCCTCCCAATTTAAAGAAAAGTACATCCATGCGAAGTATGTAGAGAAATCACTAGTCATCCGGGAAGAGGATGTACCCGAAAATCCTTCAGTTTTCATAAAAATCTGGCAAGCAGTTCAGGCTATAAATGTACGAGAAGTGTATCGCCTTATTGTAACATCAACTTCAAATCCGATAAACACGAAATATGACGACGTGGTTCCCCATGCTGATACTCAAGGACATCAGCATGATCCTGAAGCCTGTTTGAGGATTAAAGAGGCTAATGAAACAGAAAGTTGTTTCCGTGGTTGGTCTATATTACATCTGGCATGTCATTCTGATAGTAAACTAATGGTTGAGTTGTTGCTCCAATTTGGTGCTGATATAAACATGTGTGACTATCATGGAAGGACTCCATTGCACCACTGCATTTCTAGTGGGAAAAATCCATTGGCTAAGTTTTTACTAAGAAGGGGCGCAAAACCGTCAGTTAAAGATACTGCTGGACATACTGCGCTTGAACGAGCCATGGAGATGGGAGCAATAACTGACGAAGAGCTATTTATCCTGCTTGTTGAATGCCAGTAA 2325 0.4039 MASSFVKLDDSPMFQKQLFSIEETADELKDRCQNLFKGCKKFMTAIGEAYNGELAFADSLEAFGGGQDDPVSVSIGGPVISKFITALRELATFKELLRSQVEHVLVDRLTEFINVDLQDAKESRRRFDKSVHSYDQSREKFVSLKKNTPEDIVAELEEGLQNSKSSFEKSRFNLVHSLMNIEVKKKYEFLESISAIMDAHLRYFKLGYDLLSQMEPYIHQVLTYAQQSKEQANIEQDKLAKRIQEYRTQAEMENIRASSSNTQPMSGADGSRPLGLKPYKSFEAGMQSATKGEIQTVKQGYLLKRSSRMRGDWKRRFFVLDNHGSLYYYRSKGPKPAGFQSYNYSRSSEQNSGMFGRFRSRHNRAVSLNEDILGCCAVDLCTSTIKMDAEDTDLRLCFRIISPSKTYTLQAENEADRMDWVNKITGAITSLFNFQFLQQPHYGKLHSENKNSATGSSLTSQQEDSNKSLMDNAFSEEAGSVSNILRGVPGNDKCAECSAPEPDWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVKVWEPTILELFNNLGNTYCNSIWEGLLLHHDERVGESNVPSKPCSTDPSQFKEKYIHAKYVEKSLVIREEDVPENPSVFIKIWQAVQAINVREVYRLIVTSTSNPINTKYDDVVPHADTQGHQHDPEACLRIKEANETESCFRGWSILHLACHSDSKLMVELLLQFGADINMCDYHGRTPLHHCISSGKNPLAKFLLRRGAKPSVKDTAGHTALERAMEMGAITDEELFILLVECQ 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02500 774 ProSiteProfiles Ankyrin repeat region circular profile. 681 712 - -
Mepo2g02500 774 Gene3D Arfaptin homology (AH) domain/BAR domain 7 253 IPR027267 -
Mepo2g02500 774 ProSiteProfiles Ankyrin repeat profile. 681 713 IPR002110 GO:0005515
Mepo2g02500 774 ProSiteProfiles PH domain profile. 295 429 IPR001849 -
Mepo2g02500 774 ProSiteProfiles Ankyrin repeat profile. 714 746 IPR002110 GO:0005515
Mepo2g02500 774 SMART PH_update 296 431 IPR001849 -
Mepo2g02500 774 SUPERFAMILY ArfGap/RecO-like zinc finger 483 604 IPR037278 -
Mepo2g02500 774 SMART 5bar 13 220 IPR004148 GO:0005515|GO:0005737
Mepo2g02500 774 SMART ANK_2a 681 710 IPR002110 GO:0005515
Mepo2g02500 774 SMART ANK_2a 714 743 IPR002110 GO:0005515
Mepo2g02500 774 Gene3D - 618 765 IPR036770 -
Mepo2g02500 774 Gene3D - 288 439 IPR011993 -
Mepo2g02500 774 CDD ArfGap 483 598 - -
Mepo2g02500 774 Coils Coil 229 249 - -
Mepo2g02500 774 ProSiteProfiles Ankyrin repeat region circular profile. 714 745 - -
Mepo2g02500 774 Pfam Putative GTPase activating protein for Arf 484 604 IPR001164 GO:0005096
Mepo2g02500 774 PANTHER CENTAURIN/ARF 3 771 IPR045258 GO:0005096
Mepo2g02500 774 CDD PH_ACAP 298 433 - -
Mepo2g02500 774 SUPERFAMILY PH domain-like 295 447 - -
Mepo2g02500 774 Gene3D Arf GTPase activating protein 459 611 IPR038508 -
Mepo2g02500 774 Pfam BAR domain of APPL family 8 233 IPR004148 GO:0005515|GO:0005737
Mepo2g02500 774 CDD BAR_SFC_plant 16 217 IPR035670 -
Mepo2g02500 774 Pfam Ankyrin repeats (3 copies) 674 745 IPR002110 GO:0005515
Mepo2g02500 774 SUPERFAMILY BAR/IMD domain-like 8 318 IPR027267 -
Mepo2g02500 774 SMART arf_gap_3 479 611 IPR001164 GO:0005096
Mepo2g02500 774 SUPERFAMILY Ankyrin repeat 657 772 IPR036770 -
Mepo2g02500 774 Pfam PH domain 297 428 IPR001849 -
Mepo2g02500 774 PRINTS HIV Rev interacting protein signature 510 527 IPR001164 GO:0005096
Mepo2g02500 774 PRINTS HIV Rev interacting protein signature 491 510 IPR001164 GO:0005096
Mepo2g02500 774 PRINTS HIV Rev interacting protein signature 533 554 IPR001164 GO:0005096
Mepo2g02500 774 ProSiteProfiles ARF GTPase-activating proteins domain profile. 479 611 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02500 Mepo-Chr2 34751469 34762490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02500 489 598 C2H2 Transcription Factor Family AT3G07940 43.243 2.58e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02500 K12489 - gmx:100796740 1315.06