Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02462 ATGCAGATCTTCGTCAAAACTTTGACCGGAAAGACTATCACTCTCGAGGTTGAGAGTAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGTCTTGTATCTCTCGAATATACAGGGATCTACATAACTTTATGCTCATATATGCCGGTAAGCAGCTTGCTGATGACAAAACAGCTAAAGAGTACAACATTGAGGGCGGTTCTGTGCTTCACTTGGTGCTTGCATTGAGGGGTGGTAATTAG 243 0.4486 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQSCISRIYRDLHNFMLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGN 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02462 80 PANTHER UBIQUITIN 1 79 - -
Mepo2g02462 80 SMART ubq_7 1 75 IPR000626 GO:0005515
Mepo2g02462 80 FunFam Polyubiquitin-C 1 79 - -
Mepo2g02462 80 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Mepo2g02462 80 SUPERFAMILY Ubiquitin-like 1 79 IPR029071 -
Mepo2g02462 80 Gene3D - 1 80 - -
Mepo2g02462 80 Pfam Ubiquitin family 3 77 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02462 Mepo-Chr2 34391208 34395018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02462 1 79 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 69.620 3.31e-28 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02462 K08770 - lper:127310508 105.916