Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02457 ATGGGAAGATCACCTTGTTGTGAAAAAGCTCATACAAACAAAGGAGCATGGACAAAAGAAGAAGATGATAGACTTATATCATATATTAGGGCACATGGTGAAGGTTGTTGGAGATCTCTCCCTAAAGCAGCTGGCTTACTCCGATGTGGCAAAAGTTGTCGTCTCCGGTGGATTAACTATCTCAGGCCAGACCTTAAACGTGGTAACTTCACAGAAGAAGAAGATGAACTCATCATCAAACTCCATAGTCTTCTTGGTAACAAATGGTCTTTGATAGCTGGAAGATTACCGGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACTCATATAAGAAGAAAGCTTTTGAATAGAGGAATTGACCCTGCAACTCATAGGCCTTTAAACGAAGTTTCTCATTCTCAATCTCAATCTCAATCACAATCTCAATCTCTTCATCTTCAAAATCAAGAAGCTGTTACTATAGCTGTGGCAGCATCTACATCAACTACTACTGCTACAAAAACCCTACCAACAACTATATCTTTTGCATCATCCATTAAACAAGAACAATATCATCATCATCAAGAGATGAACACAAACATGGTTAAAGGGTTGGTTTTAGAACGTTGTCCTGATTTGAATCTTGAGTTAACAATTAGTCCACCACGTGTTCAAGAACATGATGAACAATTCAGAAACAGAGAGAGGAACAATCTCTGTTTTGTTTGTAGTTTGGGTTTGCAGAACAGTAAGGATTGTACTTGTGATGAAATTGTTGGAAATTCTAGCAGTGGAAATGCTTCTACTGCACCTGCTTATGATTTCTTGGGTTTGAAAGGTGGTGTTTGGGATTACAAAGGCTTAGAAATGAAATGA 861 0.3786 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPLNEVSHSQSQSQSQSQSLHLQNQEAVTIAVAASTSTTTATKTLPTTISFASSIKQEQYHHHQEMNTNMVKGLVLERCPDLNLELTISPPRVQEHDEQFRNRERNNLCFVCSLGLQNSKDCTCDEIVGNSSSGNASTAPAYDFLGLKGGVWDYKGLEMK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02457 286 CDD SANT 69 112 IPR001005 -
Mepo2g02457 286 MobiDBLite consensus disorder prediction 129 147 - -
Mepo2g02457 286 CDD SANT 16 61 IPR001005 -
Mepo2g02457 286 MobiDBLite consensus disorder prediction 123 147 - -
Mepo2g02457 286 FunFam MYB-related transcription factor 13 66 - -
Mepo2g02457 286 SMART sant 66 114 IPR001005 -
Mepo2g02457 286 SMART sant 13 63 IPR001005 -
Mepo2g02457 286 FunFam Myb transcription factor 68 137 - -
Mepo2g02457 286 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mepo2g02457 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo2g02457 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo2g02457 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo2g02457 286 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Mepo2g02457 286 Gene3D - 69 152 - -
Mepo2g02457 286 Gene3D - 14 66 - -
Mepo2g02457 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo2g02457 286 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 208 - -
Mepo2g02457 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02457 Mepo-Chr2 34323636 34325297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02457 1 286 MYB Transcription Factor Family AT4G38620 58.863 1.12e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g02457 Myb_DNA-binding 2.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02457 K09422 - gmx:780553 375.941