Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02452 ATGCTTGCTGATGATTTTCATCTTGGTGGGAATACTTGGAGCGAAATACCTAAAAATTCTTCATCAGTTATCTCAAACATTCCGCGAAAGAGATGTTTTGATGAGTTAAGCTATCTCAGCAATGGACAACCGCGTCAAAATCCAAGAGCTCTAATTGATGCCTATGGTAGTGACAAAAGCCAAGAAACTTCTGGCAGTAAGCCTCTGTTAGTGGAGCGATTGGATAAAAACGGTATGGATAAGGTTATGACAACATCATGGCAGAATACTGAAGAGGAGGAGTTCGATTGGGAAGATATGAGTCCGACACTAGTAGACCATAGTAGAAGTAATGGTTTCTTGCAACCAACTATTGCTTTCTCATCAGAAAAGGCTGTTACCGTTGCAGCAAGTGCAACTACTTCAGCGTCAAGGGTGTTTCCTGGTCTCAATTCTAATATTGAGTACCGTCCACCAGTTCTGCCAGCAACTTTTGAAACGAGGCGCTCCATAAATGTGCATGCTCCGCGTCCTCCCAGCATAACTCCTATATTTCCATCGAAGAATCCTGTTAGGAATCCATTCGAATCAATGAATGCTAATAGTACCAGTGTGAGTAATGGTCTAATTAACAGACCTTTTCCTGTGCATGAACATGGTGTTGAGAACAATGATACCAGTAAAAGAAACCTGCGTCAGTTGCCTAATCAGCTACCCAGTCTGATTTCATCTAACCCGCATAACAGTGGACAAACGCCACCATTCCGGTTTTTTCCATCTCAGGATCCAGCAGCGTCACAATTTACTTATAGCACTTCTTTGCCAGGACATTGTGCTGCTATGAGTAACACCCTGCCAAATGCACAACTTGTTATGCCACTTCCTTCGCCAGGCCAAAGAATTGCAAACAGCTCTTTCGGTTTCCTGGGGGGAGCTTTGCCACCTTTACCTCCAGCTGGCCCACATGCTCTACCCCAGATTCTACCTAATCCCAATCCTGGTCCTTCTGTGTCAAGCCAACAACCAACTGTTGGGTATTCTAATTTGTTTGGTTCACTCATGGCCCAAGGTGTTATCTCATTAACTAATCAAGCCCCTTCGCAGGATTTTGTTGGCATTGAGTTTGATCCAAATATTCTGAAGGTTCGTCACGAATCTGCAGTCAGTGCCTTATATGGTGATCTTCCCAGACAGTGCACAACTTGTGGCCTCCGATTCAAATCCCAAGATGAGCACAGAAGTCACATGGATTGGCATGTGACTAAGAACCGTATGTCTAAAAACCGCAAGCAGAAGCCCTCTCGCATGTGGTTTGTGAGTGAGACGATGTGGCTTAGTGGTGCAGAGGCATTGGGAGCTGAATCAGCTCCCGGTTTTTTGCCAACTGAGACCACTGAGGAAAAGAAAGAAGATGAAGAGTTGGCAGTTCTTGCTGACGAGGACCAAAATACATGTGCATTATGCAGAGAACCTTTTGACAAGTTTTACAGTGATGAAACAGAGGATTGGATGTATAGAGGAGCTGTATACCTTAATATGCCTAATGGAATAACAACAGGCATGGCCATGTCGCAGTTAGGCCCCATTATTCATGCTAAATGCAGATCTGAATCTACCCCGTCTGAAGTTTTTGTGATGGCTGAAGGGGGCACCTATGAAGAAGGCAGCCAAAGAAAACGAATGCGGAGCTGA 1671 0.4458 MLADDFHLGGNTWSEIPKNSSSVISNIPRKRCFDELSYLSNGQPRQNPRALIDAYGSDKSQETSGSKPLLVERLDKNGMDKVMTTSWQNTEEEEFDWEDMSPTLVDHSRSNGFLQPTIAFSSEKAVTVAASATTSASRVFPGLNSNIEYRPPVLPATFETRRSINVHAPRPPSITPIFPSKNPVRNPFESMNANSTSVSNGLINRPFPVHEHGVENNDTSKRNLRQLPNQLPSLISSNPHNSGQTPPFRFFPSQDPAASQFTYSTSLPGHCAAMSNTLPNAQLVMPLPSPGQRIANSSFGFLGGALPPLPPAGPHALPQILPNPNPGPSVSSQQPTVGYSNLFGSLMAQGVISLTNQAPSQDFVGIEFDPNILKVRHESAVSALYGDLPRQCTTCGLRFKSQDEHRSHMDWHVTKNRMSKNRKQKPSRMWFVSETMWLSGAEALGAESAPGFLPTETTEEKKEDEELAVLADEDQNTCALCREPFDKFYSDETEDWMYRGAVYLNMPNGITTGMAMSQLGPIIHAKCRSESTPSEVFVMAEGGTYEEGSQRKRMRS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02452 556 ProSitePatterns Zinc finger C2H2 type domain signature. 392 412 IPR013087 -
Mepo2g02452 556 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 37 533 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02452 Mepo-Chr2 34270973 34273247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02452 39 556 C2H2 Transcription Factor Family AT4G04885 43.540 1.96e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g02452 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02452 K14400 - gmx:100794796 494.967