Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02443 ATGACAGTTGAAAAGAGGTTTGTGTTGGTTGGGATTAGAATAGATAGCCATAGTAGACAGCTTCTCAATTGGGCTATTGTTAAAGTTGCTGAACCTGGTGATTGTGTTATTGCTGTTCACGTAGTTAAAACTAAAAGTTCAGATTATGTTTCTAAAAACAAGAGCCTAATAGATGGATATTTAGAGGTCTATGAAGGCTTGTGTGATGTGAAAAAGGTTGCTCTTTCTAGTCAAATCATAACAGGGAAGTCCATTAAAAACATTCTTGTTAGAGAAGCAAAAAACCAGAGTGCTTTGGCTCTAGTGGTAGGGGGTAAAGCTGCTACAGCTAAATATTGCGCCAAACGTCTTCCACCCACCACCAATGTTCTAGCCATCCAAGATTCAAGAATCGTCTTCGGGAGGTGCAACAGTAAACGACCACCAGGTAGTCTTATATTGGATCCAAGGCCAAGCTTAACAAGCATAGATAACCTGAGTGAGAAATCGCCACACCAAAACACCGAGGAATCGAAAGAAGAAACATTTGATGGATCAGAAAGGCACAAGTCACGATCGATATCCATGTTTGCAGACGATCCTTCTAAGCGGAAGCTTGGATGGCCTCTACTTCGCAAATCGAATTCAGACATCTCACAAAGTCAGCATGGAAGGGGTATTTCGGTAGTACAATGGGTAATGAACTTACCAGATCGTTCACCGCATAGTAGTCCTCAATCATCTTCCTCAGACGAAAATCCATTCGAAAGGAGCATAAGTGACCTTCTTGAGGATGAGAGCTTAAAAAATCATTTACCTGCATCAGTTGTACTCCCAAAAGGCCTAGAAGGGATATTAAATGTAAATTCACTCAATTGCAAGTGGCTCAGCCTTGAGGCTCTCAAGTCTTGTACCAGTCAATTTTCTTCAGAAAATTTGATTGGGAAAGGAGGAAGCAACCGTGTGTACAAAGGAATTCTTTCTGATGGAAAACCAATTGCAGTTAAAGTATTGCGATCATCAAAAGAAGCATGGAAAGATTTTGCCTTTGAGATGGAAATAATATCCTCATTGAAGCACAAAAACATTACTCAACTACTTGGAATTTGCATAGAGAACAATACTTTAATATCTGTTTATGAGTATTTCCCTAAAGGAAGCTTAGAGGAAAATCTACATGGAAAAAGCAAGGATGGATCTCCTTTGTCATGGGAAGTGAGATTCAATGTAGCTGTTGGAGTAGCTGAGGCCCTTGATTACCTACACACAGAAGCTTCGAAGCATGTCATACATAGAGATGTCAAGTCTTCAAACATTCTTCTTTCCAAGGAGCTTGAGCCACAATTGTCTGATTTTGGACTTGCAATATGGGGACCAACAACAACATCCTTTTTGACACAAGAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAAGTTAGTGACAAGATAGATGTCTATGCCTTTGGTGTAGTACTACTTGAACTAATATCAGGTAGGGAACCGATCAGCTCCGAACCTTGCAAAGGACAGGAGAGCTTGGTAGCTTGGGCAAAACCAATAATAGAGAGTGGGGATATTAAAGGTTTGTTGGATCCAAAATTAGAAGGGAAGCTTGATGAGACCCAAATGAAAAGAATGGTTTTGGCAGCATCTTTATGCATCGCACGGGCTGCTAGACTTCGTCCTAAATTTAATCAGATATTGAAGATCCTAAAAGGGAACAATGAAGATGAATATTGCTTCAATGAGTATTCAGAAAATGAAGAAAACATTGATGATGAAGTGTATCCAAATTCAAGTACAGAGTTACACCTAACTCTTGCATTACTTGGTGTTGATGATGACAGTACATCATGTAGTAGTACAGACCATAGCTATTGTGAGAATTTGAAAGATCAATGGAGCAGGTCTTTGAGTTTTAACTAG 1929 0.395 MTVEKRFVLVGIRIDSHSRQLLNWAIVKVAEPGDCVIAVHVVKTKSSDYVSKNKSLIDGYLEVYEGLCDVKKVALSSQIITGKSIKNILVREAKNQSALALVVGGKAATAKYCAKRLPPTTNVLAIQDSRIVFGRCNSKRPPGSLILDPRPSLTSIDNLSEKSPHQNTEESKEETFDGSERHKSRSISMFADDPSKRKLGWPLLRKSNSDISQSQHGRGISVVQWVMNLPDRSPHSSPQSSSSDENPFERSISDLLEDESLKNHLPASVVLPKGLEGILNVNSLNCKWLSLEALKSCTSQFSSENLIGKGGSNRVYKGILSDGKPIAVKVLRSSKEAWKDFAFEMEIISSLKHKNITQLLGICIENNTLISVYEYFPKGSLEENLHGKSKDGSPLSWEVRFNVAVGVAEALDYLHTEASKHVIHRDVKSSNILLSKELEPQLSDFGLAIWGPTTTSFLTQEDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSEPCKGQESLVAWAKPIIESGDIKGLLDPKLEGKLDETQMKRMVLAASLCIARAARLRPKFNQILKILKGNNEDEYCFNEYSENEENIDDEVYPNSSTELHLTLALLGVDDDSTSCSSTDHSYCENLKDQWSRSLSFN 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02443 642 SMART serkin_6 301 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g02443 642 FunFam Putative receptor-like serine/threonine-protein kinase 376 589 - -
Mepo2g02443 642 PANTHER OS08G0249100 PROTEIN 168 590 IPR046958 -
Mepo2g02443 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Mepo2g02443 642 CDD STKc_IRAK 307 574 - -
Mepo2g02443 642 SUPERFAMILY Protein kinase-like (PK-like) 283 572 IPR011009 -
Mepo2g02443 642 Gene3D Phosphorylase Kinase; domain 1 276 375 - -
Mepo2g02443 642 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 270 375 - -
Mepo2g02443 642 MobiDBLite consensus disorder prediction 163 192 - -
Mepo2g02443 642 MobiDBLite consensus disorder prediction 230 249 - -
Mepo2g02443 642 MobiDBLite consensus disorder prediction 143 193 - -
Mepo2g02443 642 CDD USP_Like 8 104 - -
Mepo2g02443 642 MobiDBLite consensus disorder prediction 229 249 - -
Mepo2g02443 642 Pfam Protein kinase domain 302 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g02443 642 Gene3D Transferase(Phosphotransferase) domain 1 376 589 - -
Mepo2g02443 642 ProSiteProfiles Protein kinase domain profile. 301 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02443 Mepo-Chr2 34192466 34196131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02443 289 641 Trihelix Transcription Factor Family AT1G70460 39.722 1.92e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo2g02443 Pkinase 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02443 - - tpra:123913065 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02443 2 34192466 34196131 Mepo2g02443 2 34192466 34196131 ECH