Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02442 ATGGACGGTGATAGAAATGGAAACCCCGAAGCCATGTCTTTTTCCGATCTCGGACTCTCGGAATGGATGGTGCAGCATTGCATGAAACTCGGGCTGCAAACTCCGCGGCGCGTGCAACAACACTGCATTCCTAAGGTTCTAGAAGGCCGTCATGTAGTTGGAATCGATGAGACTGGTAGTGGTAAAACGGCAGCTTTTGCGCTTCCTATTCTTCAACGCCTCGCCGAGCATCCGAAACCTTTCGGTTTGTTTGTGTTTGCTCTCTTGCTGACGCCCACGCGCGAGCTTGCGATTCAGCTGGCAGACCAGTTTTTGGCCCTTGGATCCTCGCTCAGCCCCAGACTTACGGTGGTTGTGGGTGATTATGACAGTCCTAGCCAGGCAAAACAATTGGTAGCCAGTCCTCACCTTGTTATCGCCACTCCAGAGAGGCTCAGAGTTTTGCTTCTGGATAATCCTGAAATCGCTACTATTTTCGCTACCACTAAGTTTCTTGTTTTGGACGAAGCAGACCAACTTCTGGATGTTGCTTTTCGGGATGAATTGAATGTTATCGTCCAGTGCTTACCACAAAACCGGCAAAACCTCTTCTTTTCAGAAACCATGACTAGTAATCTGAAAAAGATGTGTGACTGTTATCGAGATAACATGTATGCCTTCGAGGCTTGTGAAGGGCTGAAGTTGCTTGAGCATTTGAAGATTGATGAATCCCCGACTGTAGAACTCTGTGAAATGGATTCTAAACCTGGCAGCCGCACATGGATTTCTCCCATAACCACTAGCTATTGCAATACAACGGACTGTGATAACGCTGGAAACTTCAGACACATGTCGTTTTCAGATCTCGGACTCTCGGAATGGATGGTGCAGGGTTGCGATAAACTCGGGATGCAATCTCCATGGCCCGTGCAACGACACTGCATTCCAAAGGTTCTAGAAGGCCATCATGTAATTGGAATTGATAAAACTGGTAGTGGTAAAACAGCAGCTTTTGCGCTTCCTATTCTTCAACGCCTCGGTGAGACTCCTTTTGGTGTGTTTGCTCTTGTACTGACGCCCACCCGCGAGCTTGCGGTTCAGCTGGCTCACCAGTTTTGGATCCTTGGGTCCTCGCTCCGCCTCATCCTTACAGTGGTTGTGGGTGGTTTAGACAAACGTATACAGGCAAAACAATTGGTAGCCAGGCCTAACCTTGTTATTGCCACTCCAGAGAGGCTCAAAGTTATGCTTCAGGATAATCCTGAAATCGCTCCTATTTTCGCTGCCACTAAGTTTCTTGTCTTGGATGAAGCAGACCAACTCTTGGATGTTGGTTTTCAGGAGGAATTGAAAGTGATCTTCCAGTGCTTACCAGAAAACCGGCAAAGCCTGTTCTTTTCAGCAACCATGACTAGTAATCTGCAAAAGATGTGTGACCGTTATTAA 1425 0.4751 MDGDRNGNPEAMSFSDLGLSEWMVQHCMKLGLQTPRRVQQHCIPKVLEGRHVVGIDETGSGKTAAFALPILQRLAEHPKPFGLFVFALLLTPTRELAIQLADQFLALGSSLSPRLTVVVGDYDSPSQAKQLVASPHLVIATPERLRVLLLDNPEIATIFATTKFLVLDEADQLLDVAFRDELNVIVQCLPQNRQNLFFSETMTSNLKKMCDCYRDNMYAFEACEGLKLLEHLKIDESPTVELCEMDSKPGSRTWISPITTSYCNTTDCDNAGNFRHMSFSDLGLSEWMVQGCDKLGMQSPWPVQRHCIPKVLEGHHVIGIDKTGSGKTAAFALPILQRLGETPFGVFALVLTPTRELAVQLAHQFWILGSSLRLILTVVVGGLDKRIQAKQLVARPNLVIATPERLKVMLQDNPEIAPIFAATKFLVLDEADQLLDVGFQEELKVIFQCLPENRQSLFFSATMTSNLQKMCDRY 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02442 474 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 43 220 IPR014001 -
Mepo2g02442 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 216 IPR027417 -
Mepo2g02442 474 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 308 474 IPR014001 -
Mepo2g02442 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 473 IPR027417 -
Mepo2g02442 474 SMART ultradead3 296 474 IPR014001 -
Mepo2g02442 474 SMART ultradead3 31 235 IPR014001 -
Mepo2g02442 474 Pfam DEAD/DEAH box helicase 302 469 IPR011545 GO:0003676|GO:0005524
Mepo2g02442 474 Gene3D - 3 221 IPR027417 -
Mepo2g02442 474 Pfam DEAD/DEAH box helicase 37 208 IPR011545 GO:0003676|GO:0005524
Mepo2g02442 474 Gene3D - 261 474 IPR027417 -
Mepo2g02442 474 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 274 470 - -
Mepo2g02442 474 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 12 40 IPR014014 GO:0003724
Mepo2g02442 474 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 277 305 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02442 Mepo-Chr2 34188208 34191050 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02442 276 463 Eukaryotic Initiation Factors Gene Family AT3G13920 37.766 2.69e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02442 K14778 - gmx:100804060 285.804