Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02383 ATGGAAGTTGTTGTAGCGGAAGCGTTGAAACCAAGCTTGAGGACAGAATCTATTTTCCAACAAACAATTTGCGAAGAGATTTTGTGTTTGAACGCAAACAACGTTGTTGTCGGAGAAGATTTTTCTGTCGACGACTTGCTTGATTTTTCCAACGGTGAATTTCAACATGGTTCTGTTGGAAAAGAAATTGATGTCTACGAGGAGGAGGAGGAAGAAGAAGAACATGAGAAAAACAGCACCACCTCAGGTTCTGAACATGACCGAACCGAAGATGACAACAATTCAAATTCCACAACATTTTCTGGCGCCGGAGACGGCGAGTCTGACTCCATTTTTGCCGGTGGTTTAGCAGTTCCGGCCGATGATGTTGCGGATTTGGAATGGGTGTCTCACTTTGTCGATGATTCCATACCAGAACTCTCTCTATTGTATCCAGTTCAGGCCCGGGCCGAACCGGAACCTAGACCGGACCCAACCAATGCTTATTCCCAACTCTCTATAATCCGCAGAAAGCCCAGAACAACCAAGTCAAGAAGGCCCAACTGTAACGTGTGGATTTTCAACCATATACTCTGTTCAGCGAAGAAGCAGAGGAAAAAGCCCGAAGCCCAAACGGGTGGGGCTCATTTTCAACGACGGTGCAGCCACTGCCATGTTCAGAAAACACCACAGTGGAGAGCCGGTCCGCTTGGACCGAAAACATTATGTAATGCTTGTGGTGTTCGGTTTAAGTCCGGTCGGCTTTTCCCGGAGTATAGACCGGCGTGCAGCCCGACGTTTTCCGGTGAAATTCATTCGAACAGCCACCGTAAGGTTTTAGAAATGAGGCGGAGGAAGGAGGTGGATGAACCGGTTTCCGGTCTGAACCGGATTGAAATGGTCACGAGTTGGTGA 894 0.4799 MEVVVAEALKPSLRTESIFQQTICEEILCLNANNVVVGEDFSVDDLLDFSNGEFQHGSVGKEIDVYEEEEEEEEHEKNSTTSGSEHDRTEDDNNSNSTTFSGAGDGESDSIFAGGLAVPADDVADLEWVSHFVDDSIPELSLLYPVQARAEPEPRPDPTNAYSQLSIIRRKPRTTKSRRPNCNVWIFNHILCSAKKQRKKPEAQTGGAHFQRRCSHCHVQKTPQWRAGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSGEIHSNSHRKVLEMRRRKEVDEPVSGLNRIEMVTSW 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02383 297 PANTHER GATA TRANSCRIPTION FACTOR 148 282 - -
Mepo2g02383 297 MobiDBLite consensus disorder prediction 76 93 - -
Mepo2g02383 297 ProSitePatterns GATA-type zinc finger domain. 214 239 IPR000679 GO:0006355|GO:0043565
Mepo2g02383 297 FunFam GATA transcription factor 203 288 - -
Mepo2g02383 297 SMART GATA_3 208 262 IPR000679 GO:0006355|GO:0043565
Mepo2g02383 297 Pfam GATA zinc finger 214 247 IPR000679 GO:0006355|GO:0043565
Mepo2g02383 297 PIRSF Txn_fac_GATA_plant 16 295 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mepo2g02383 297 Gene3D - 209 283 IPR013088 GO:0006355|GO:0008270
Mepo2g02383 297 MobiDBLite consensus disorder prediction 67 106 - -
Mepo2g02383 297 ProSiteProfiles GATA-type zinc finger domain profile. 212 244 IPR000679 GO:0006355|GO:0043565
Mepo2g02383 297 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 210 271 - -
Mepo2g02383 297 CDD ZnF_GATA 213 270 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02383 Mepo-Chr2 33598081 33600440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02383 40 282 C2C2-Gata Transcription Factor Family AT4G36240 45.914 6.66e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo2g02383 GATA 6.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02383 - - gmx:100776188 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02383 2 33598081 33600440 Mepo2g02383 2 33598081 33600440 ECH
Mepo3g08005 3 92914341 92915712 Mepo2g02383 2 33598081 33600440 ECH