Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02328 ATGTTACATTGTCTTAACACTTCAGGAAATCTAGTAGGAGGAACCATTTCCGACATGACAGTGTTGGAAAGACAAAGAGCAAGGAAGAAGTTCCAACATGAACATGAACAAGATCACGAACACCGACATTACTTTCCCGGAAATGGTTTCTCTTCTTCACAGCAATTTTTGATGGTTGGTTGTGATTCTGCTCTTGGTGAAGTTGTAGCTAACTCTATGAAACCCGACCCCGGTTTTGAAAACTGCGAAGAAACCGTTAAGAAAAGGAAAGCTGATAACAAGGTGGATATCAAGTCCAAAGACAAGAGGATCAAAGTGAGTGTTGAAGAAGGTGAATCCAAAATCACTGAGCAAACAAAGGGACAGAAGAATACAAAGATGAAAAACAAAGAAAATTGTGATGACGTTGGTTCCAAGGAAAATTCAAAAGGTTCAGAGATTCAAAATCAAAAGCCTGATTACATTCATGTTCGAGCACGTCGCGGTCAAGCTACTGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATAAGCGAAAGGATGAAGTATTTGCAAGATTTAGTACCAGGATGCAACAAAATTGCAGGCAAAGCTGGAATGCTTGATGAAATTATTAACTATGTTCAGTCTCTTCAAAGACAAGTTGAGTTCTTGTCAATGAAATTAGCAGCTGTAAACCCAAGACTTGACTTCAACATTGATGAATTGTTTGCCAAAGAGGTGTTTACTCAAAATTTTCCAATGATGCAATCAGAAATGTCTAACCCTGCATATCTTCAATTCAATTCAGCACAACAACTGGTTTCATGTTGTGGTGGATTGATAAACAATATGGGAATAGTCCCTCCGGAAATTGGGGTTCGAAGGAACATTAATGCACCGGCATCTGCGTCTTTACCTGAAATCTTTCTCGACTCATCGTGTTTCACCCATATCCTACCATCCTCAACTTGGGAAGGTGATTTTCAAAATCTTCATAGTGTGGATTTTGATCAAGGACGATCAACATCATTTCCTTCTCAACCATTTACAGGCATGATTGAAGCTAGCAATCTGAAGATGGAGATGTAA 1077 0.389 MLHCLNTSGNLVGGTISDMTVLERQRARKKFQHEHEQDHEHRHYFPGNGFSSSQQFLMVGCDSALGEVVANSMKPDPGFENCEETVKKRKADNKVDIKSKDKRIKVSVEEGESKITEQTKGQKNTKMKNKENCDDVGSKENSKGSEIQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFTQNFPMMQSEMSNPAYLQFNSAQQLVSCCGGLINNMGIVPPEIGVRRNINAPASASLPEIFLDSSCFTHILPSSTWEGDFQNLHSVDFDQGRSTSFPSQPFTGMIEASNLKMEM 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02328 358 MobiDBLite consensus disorder prediction 109 141 - -
Mepo2g02328 358 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 213 IPR011598 GO:0046983
Mepo2g02328 358 MobiDBLite consensus disorder prediction 109 151 - -
Mepo2g02328 358 FunFam Basic helix-loop-helix transcription factor 160 232 - -
Mepo2g02328 358 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 232 IPR036638 GO:0046983
Mepo2g02328 358 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 264 IPR024097 GO:0006355
Mepo2g02328 358 SMART finulus 169 219 IPR011598 GO:0046983
Mepo2g02328 358 Gene3D - 160 234 IPR036638 GO:0046983
Mepo2g02328 358 Pfam Helix-loop-helix DNA-binding domain 167 214 IPR011598 GO:0046983
Mepo2g02328 358 CDD bHLH_AtBPE_like 153 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02328 Mepo-Chr2 33036805 33039355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02328 12 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 39.726 1.47e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g02328 HLH 3.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02328 - - gmx:100794256 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02328 2 33036805 33039355 Mepo2g02328 2 33036805 33039355 ECH
Mepo2g02328 2 33036805 33039355 Mepo5g00864 5 8421501 8424123 ECH