Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02325 ATGGCTTCTGCAGATGTTGAATACCGTTGCTTCGTCGGAGGTCTTGCATGGGCCACCGATAGCGAAGCTCTCGAGAAAGCCTTCTCTCAATACGGAGAAATCATCGATTCGAAGATTATCAACGATCGTGAAACTGGAAGATCAAGAGGTTTTGGATTTGTGACATTTGCTGATGAGAAATCGATGAGAGATGCGATCGAAGGGATGAACGGTCAGGATATGGATGGAAGGAACATTACTGTGAATGAAGCTCAGAGCCGTGGTAGCGGTGGAGGAGGCCGTGGTGGTGGTGGATATGGTGGAGGTGGTGGTGGTGGATATGGTGGTGGTCGCCGTGAGGGTGGTTACAACAGAGGCAGTGGTGGTGGTGGATATGGAGGAGGAGGTGGTGGTTATGGTGGTGGTAGGGACCGTGGTTATGGAGATGATGGTGGTTCCCGCTATTCTTCACGCGGCGGTGGCGGTGGTGATGGAGGAAGCTGGAGAAGTTAG 492 0.5224 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGRGGGGYGGGGGGGYGGGRREGGYNRGSGGGGYGGGGGGYGGGRDRGYGDDGGSRYSSRGGGGGDGGSWRS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02325 163 Gene3D - 2 107 IPR012677 -
Mepo2g02325 163 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Mepo2g02325 163 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Mepo2g02325 163 FunFam Glycine-rich RNA-binding protein GRP1A 2 117 - -
Mepo2g02325 163 MobiDBLite consensus disorder prediction 68 163 - -
Mepo2g02325 163 SUPERFAMILY RNA-binding domain, RBD 8 96 IPR035979 GO:0003676
Mepo2g02325 163 SMART rrm1_1 9 82 IPR000504 GO:0003723
Mepo2g02325 163 CDD RRM2_NsCP33_like 9 84 - -
Mepo2g02325 163 PANTHER GEO13361P1-RELATED 3 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02325 Mepo-Chr2 32971221 32972368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02325 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 34.177 2.20e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02325 - K13195 ccaj:109800369 158.303