Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02324 ATGGGTTCTTCTGATGTTGAGTACCGTTGCTTCGTCGGAGGTCTTGCATGGGCCACCGATAGCCAAGCTCTCGAGCAAGCTTTCTCTAAGTTTGGTGAAATCACTGATTCCAAGGTTATCAATGATCGTGAAACTGGACGATCAAGAGGTTTTGGATTTGTGACATTCGCTGAGGAGAAATCCATGAGAGATGCAATTGAAGAGATGAACGGTCAGGATATTGACGGCAGGAATATTACTGTGAATGAAGCTCAGTCCCGTGGTAGTGGTGGAGGAGGTAGAGGCGGCGGCGGCGGCGGTGGTTATGGCGGAGGTGGCGGTGGTTATGGAGGTGGAGGTCGTCGTGAGGGTGGATACAGCAGAAGCGGTGGTGGTGGAGGATATGGTGGAGGTGGTGACCGTGGATATGGTGGTGGAGGTGGTGACCGTGGATATGGTGGTGGAGGTGGTGACCGTGGATATGGTGGTGGAGGTGGTGACCGTGGTTATGGTGGTGGAGGTGGCGGTGATCGCTACTCTCGCGGTGGTGGTGCTGATAGCGGTCGAAACTGGAGGGAATAG 561 0.5419 MGSSDVEYRCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDGRNITVNEAQSRGSGGGGRGGGGGGGYGGGGGGYGGGGRREGGYSRSGGGGGYGGGGDRGYGGGGGDRGYGGGGGDRGYGGGGGDRGYGGGGGGDRYSRGGGADSGRNWRE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02324 186 Gene3D - 2 104 IPR012677 -
Mepo2g02324 186 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Mepo2g02324 186 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Mepo2g02324 186 CDD RRM2_NsCP33_like 9 84 - -
Mepo2g02324 186 MobiDBLite consensus disorder prediction 79 186 - -
Mepo2g02324 186 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Mepo2g02324 186 PANTHER GEO13361P1-RELATED 4 172 - -
Mepo2g02324 186 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02324 Mepo-Chr2 32963155 32964269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02324 10 87 Eukaryotic Initiation Factors Gene Family AT2G23350 33.333 6.97e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02324 - K13195 thj:104824824 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02324 2 32963155 32964269 Mepo2g02324 2 32963155 32964269 ECH