Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02323 ATGGCTGATGTTGAATACCGTTGCTTCGTCGGAGGTCTTGCATGGGCCACCGACAACGAAGCTCTCGAGAAAGCTTTCTCTCAATACGGCGAGATCGTTGATTCCAAGATCATTAACGATCGTGAAACTGGAAGATCAAGAGGTTTTGGATTTGTGACGTTCGCTAACGAGAAATCTATGGACGATGCCATTGAAGCAATGAACGGTCAGGATTTGGACGGACGTAACATCACCGTGAACAAAGCTCAGAGCCGTGGTAGCGGTGGTGGTGGAGGAGGCCGTGGTGGCGGTGGATATGGTGGAGGTGGTGGTTATGGTGGTGGAGAACGTCGTGGTTACGGAGGAGGCGGTGGTGGTGGATACGGAGGAGGCGGTGGTGGATATGGTGGCGGTGGTGATCGCCGTGGTGGAGGCGGCTACAGCAGAGGAGGTGGTGGTGGAGGATATGGTGGTGGTGGATACAACAGAGGTGGAGGTGATGGTGGTTATTAG 492 0.5407 MADVEYRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMDDAIEAMNGQDLDGRNITVNKAQSRGSGGGGGGRGGGGYGGGGGYGGGERRGYGGGGGGGYGGGGGGYGGGGDRRGGGGYSRGGGGGGYGGGGYNRGGGDGGY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02323 163 FunFam Glycine-rich RNA-binding protein GRP1A 1 109 - -
Mepo2g02323 163 Gene3D - 2 105 IPR012677 -
Mepo2g02323 163 PANTHER GEO13361P1-RELATED 3 157 - -
Mepo2g02323 163 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 77 IPR000504 GO:0003723
Mepo2g02323 163 SUPERFAMILY RNA-binding domain, RBD 6 116 IPR035979 GO:0003676
Mepo2g02323 163 CDD RRM2_NsCP33_like 7 82 - -
Mepo2g02323 163 SMART rrm1_1 7 80 IPR000504 GO:0003723
Mepo2g02323 163 MobiDBLite consensus disorder prediction 124 163 - -
Mepo2g02323 163 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 84 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02323 Mepo-Chr2 32953826 32955167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02323 8 86 Eukaryotic Initiation Factors Gene Family AT4G34110 36.709 1.69e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02323 - K13195 thj:104824824 152.14