Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02276 ATGGACGACGATTACGCTTCCACCGATGAAGATTATCAATACTCCGATCAAGACGTCGAAGAAGAAGATTCCGTCGGTGAATTCTACGAAAACGCTGACGATTCTATTCAGTTGCCCTCTTCTATTTCTCCCGCTGCTCAGGTGATTACGAAGGAATCACTGATAATTGCACAGAAGGAGGACTTGCGCAAAGTGATGGACATGCTTTCTGTAAGACAAGAACATGCACGAATAATGCTTATTTATCATCGTTGGGATGTGGAAAAATTGTTTGAAGTTTATGTAGAAAAAGGGAAGGCATTTATGTTTGCTCAGGCTGGTGTTAGTGTTGATGAATATCATGACTCTGTCTCGCTGGATAGTGCTATTGTTATGTGTGAAATCTGCATGGACGACATTCCCAGTGATGAAGCAACAAGAATGGACTGTGGTCACTGCTTTTGCAATACATGTTGGACACAGCATTTCTTTGTCAAGGTAAACGAGGGTCAAAGTAAACGCATCAGATGCATGGCTCACAAATGCAATTCGATTTGTGATGAAGCTGTCGTAAGAACTTTACTTGGTAGAAAGCACCCTGATATGGCAGAAAAGTATGAACGCTTTCTTCTTGAATCCTACATCGAAGACAATAAGAGAGTTAAATGGTGTCCGAGCACGCCACATTGTGGGAATGCAATTCGTGTTGGGGGTGATGATGACTTGTGTGAGGTAGAATGTTCATGTGGTGAACAATTTTGTTTTAAATGCTTGTCAGAAGCACACTCCCCCTGTTCGTGTTTGATGTGGGAGCTCTGGGAAAAGAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATAACTGTTCATACAAAATCCTGTCCAAAGTGCCACAAACCGGTGGAGAAAAATGGTGGTTGTAATTTGGTTAGCTGTATTTGCGGCCAAGCATTTTGTTGGTTGTGTGGTGGAGCTACTGGCCGTGATCATACTTGGTCAAGTATAGCTGGTCACAGCTGTGGTCGCTACAAAGAACAAGAGAAATCAGCTGAGCGGGCAAAGAGGGATCTCTACAGGTACATGCATTATCATAACCGGTATAAAGCTCACACAGACTCCTTTAAGCTTGAAAGTAAACTGAAAGATATCATTCAAGGGAAGATTTCTATTACGGAAGAAAAACATTCTGGACGAAAAAAAACTGAACTCAATGATTATAGCTGGGTAAATAATGGACTCTTGAGACTTTTCAGATCTAGACGCGTCCTTTCATATTCATATGCGTTTGCATTTTATATGTTTGGAGATGAGCTTTTTAAAGAACAAATGTCAGAAGCTGAAAGGGAAATGAAACAGAACTTATTTGAGGATCAACAGCAGCAGTTAGAGGCAAATGTTGAAAAACTTTCTAAGATTTTGGAGGAGCCTTTCGACACCTTTAAATATGCTAAGCTTATGGAGATAAGGATGCAGATAATAACTCTGTCTGCACTCATTGACGATCTTTGTAAAAAAATGTATGAGTGCATTGACAATGATTTATTAGATTCTATTAATCTCGGTAGTGTCCACAGTATAGCACCATATAAATCAAAGGGCATAGAGAAGGCTTCAGAGCTTCCGGTTTGTTGGAGCAATAAAGCTGACAATACGGGTGTAACAGCAGAGCTTAATCAGTCAGAAGAGAGTGGATGTTCTTCTCGTAAGCGTGCCAGAAATGAAGGTGGCTTTTTTGATCTAAACTTGCCAGCTGAAGTTGTAGACAGAAATTGA 1752 0.4058 MDDDYASTDEDYQYSDQDVEEEDSVGEFYENADDSIQLPSSISPAAQVITKESLIIAQKEDLRKVMDMLSVRQEHARIMLIYHRWDVEKLFEVYVEKGKAFMFAQAGVSVDEYHDSVSLDSAIVMCEICMDDIPSDEATRMDCGHCFCNTCWTQHFFVKVNEGQSKRIRCMAHKCNSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSTPHCGNAIRVGGDDDLCEVECSCGEQFCFKCLSEAHSPCSCLMWELWEKKCRDESETVNWITVHTKSCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGRDHTWSSIAGHSCGRYKEQEKSAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKDIIQGKISITEEKHSGRKKTELNDYSWVNNGLLRLFRSRRVLSYSYAFAFYMFGDELFKEQMSEAEREMKQNLFEDQQQQLEANVEKLSKILEEPFDTFKYAKLMEIRMQIITLSALIDDLCKKMYECIDNDLLDSINLGSVHSIAPYKSKGIEKASELPVCWSNKADNTGVTAELNQSEESGCSSRKRARNEGGFFDLNLPAEVVDRN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02276 583 CDD Rcat_RBR_ARI1-like 281 334 - -
Mepo2g02276 583 SUPERFAMILY RING/U-box 123 209 - -
Mepo2g02276 583 Pfam Ariadne domain 337 583 IPR045840 -
Mepo2g02276 583 SUPERFAMILY RING/U-box 267 325 - -
Mepo2g02276 583 CDD BRcat_RBR_ANKIB1 204 269 - -
Mepo2g02276 583 Pfam IBR domain, a half RING-finger domain 197 260 IPR002867 GO:0008270
Mepo2g02276 583 ProSiteProfiles TRIAD supradomain profile. 122 337 IPR044066 -
Mepo2g02276 583 ProSiteProfiles Zinc finger RING-type profile. 126 174 IPR001841 -
Mepo2g02276 583 SMART ibrneu5 197 260 IPR002867 GO:0008270
Mepo2g02276 583 SMART ibrneu5 268 333 IPR002867 GO:0008270
Mepo2g02276 583 SUPERFAMILY RING/U-box 197 266 - -
Mepo2g02276 583 CDD RING-HC_RBR_TRIAD1 124 177 - -
Mepo2g02276 583 FunFam RBR-type E3 ubiquitin transferase 120 211 - -
Mepo2g02276 583 MobiDBLite consensus disorder prediction 1 24 - -
Mepo2g02276 583 Gene3D - 256 510 - -
Mepo2g02276 583 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 211 IPR013083 -
Mepo2g02276 583 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 53 418 IPR031127 GO:0004842|GO:0016567
Mepo2g02276 583 FunFam RBR-type E3 ubiquitin transferase 256 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02276 Mepo-Chr2 32436369 32440703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02276 66 561 ARIADNE family AT2G16090 66.600 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02276 K11968 - gmx:100783343 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02276 2 32436369 32440703 Mepo2g02276 2 32436369 32440703 ECH