Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02242 ATGCCTTCTCCTTCATTTCATAAGCTTGTTCTACCCTCCACTCTCCAAGCTAAGCAACTGAGGCTTCCCGATGATTTTATGAGGAAATATGGTGGTGATATTTCTCCAACTGTTACTCTCACAGTTCCTGATGGCAGTGTGTGGCGTGTAGGAATGAAAAAGGTAGACAACAAATTTTGGTTCCTTGATGGCTGGAATGAATTTGTTCAAAACTATTCCATTAGTACTGGATACTTGTTGGTATTCAAATATGAAGGAAAGTCGTATTTCACTGTTAATATTTTTAGTTTGCCTAATTCTGAGATTAACTATCAATCACCCGCACAAAGAAGTAATGAAGGGTCTCTCTTTCCAAAACGTCTTACTATTTTCGAAGAAATGGAAGATGAAGATTCTGTTGAAATCATGGACCCGTCGCCTAGGAACCTTACGCCTAGCCTATTGCAAAACAAAGCAGTTTCCGGGTCCGATGATAAATTTACTCCTGGCAAGTCTCGTCCGCCTCCAGCACTGCAGAATCTGTTTAATGGATCTAAACTTAATAGCATAAACTGGGGTGAAGGTGGGAATACTCCTTCCAGAAATGCCAATTCAGTAGACAACCAGTTGACCAGAGATATAGGTCTCCAGTTTAATGTCGTTGAGTTTAAAAAGTCTAATGAAGAGTTGAAGTTGCGTGCGGCTACTGATGAAAAGGTTAAGAAAACTGCTGTAAAGAAGAGGAAATCAGATGTCCAGGAACCTCCTTCCGAACATGAAGATGAGGTAGAAATGCGCAATAGGTTTTATGAAAGTGCATCCGCAAGGAAAAGAACTGCGACAGCTGAAGAAAGAGAGAAGGCCATAAATGCAGCAAAATCATTTGAACCATCTAATCCTTTCTGTCGGGTTGTCCTACGACCCTCCTATTTATATAGGGGGTGCATAATGTATCTACCATCTTGCTTTGCAGAGAAGAACTTGAATGGCGTTTCAGGAATTATCAAACTTCAAATCTCTGATGGGAGACAGTGGCCAGTTCGCTGCCTTTATAGAGGTGGTAGAGCTAAGTTAAGCCAGGGGTGGTATGAGTTTTCGCTGGAGAACAATTTAGGGGAAGGCGATGTGTGTGTGTTTGAGCTGGTTGCAACGAAGGAAGTAGTGCTGCAGGTTACTGTATTTCGTATTACAGAGGATGAAAGACCGTTGAGCCCACAGCCTTTGCAGCAGAACCAACATGTGAAACTGGTAAACGTTCCGTTTCAGCATCACCTCGCTTCAACTAAACTGATTAGAAATTAA 1281 0.4184 MPSPSFHKLVLPSTLQAKQLRLPDDFMRKYGGDISPTVTLTVPDGSVWRVGMKKVDNKFWFLDGWNEFVQNYSISTGYLLVFKYEGKSYFTVNIFSLPNSEINYQSPAQRSNEGSLFPKRLTIFEEMEDEDSVEIMDPSPRNLTPSLLQNKAVSGSDDKFTPGKSRPPPALQNLFNGSKLNSINWGEGGNTPSRNANSVDNQLTRDIGLQFNVVEFKKSNEELKLRAATDEKVKKTAVKKRKSDVQEPPSEHEDEVEMRNRFYESASARKRTATAEEREKAINAAKSFEPSNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGIIKLQISDGRQWPVRCLYRGGRAKLSQGWYEFSLENNLGEGDVCVFELVATKEVVLQVTVFRITEDERPLSPQPLQQNQHVKLVNVPFQHHLASTKLIRN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02242 426 CDD B3_DNA 4 96 IPR003340 GO:0003677
Mepo2g02242 426 SMART B3_2 295 390 IPR003340 GO:0003677
Mepo2g02242 426 SMART B3_2 6 98 IPR003340 GO:0003677
Mepo2g02242 426 Gene3D - 1 97 IPR015300 -
Mepo2g02242 426 PANTHER B3 DOMAIN-CONTAINING 3 382 - -
Mepo2g02242 426 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Mepo2g02242 426 CDD B3_DNA 293 388 IPR003340 GO:0003677
Mepo2g02242 426 Pfam B3 DNA binding domain 9 96 IPR003340 GO:0003677
Mepo2g02242 426 Pfam B3 DNA binding domain 298 388 IPR003340 GO:0003677
Mepo2g02242 426 SUPERFAMILY DNA-binding pseudobarrel domain 288 389 IPR015300 -
Mepo2g02242 426 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Mepo2g02242 426 ProSiteProfiles B3 DNA-binding domain profile. 295 390 IPR003340 GO:0003677
Mepo2g02242 426 Gene3D - 272 392 IPR015300 -
Mepo2g02242 426 MobiDBLite consensus disorder prediction 152 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02242 Mepo-Chr2 32123611 32126683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02242 1 391 B3 DNA Binding Superfamily AT3G18990 50.891 2.97e-126 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo2g02242 B3 6.4e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02242 - - gmx:100813285 652.514