Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02238 ATGTTATTCTATATAATGAAGTTTATCTTTGCTTATACAAACGGAAAAAAAAAACAGATGGATCATGAGCAGCAAGACAAGCCATCCTTTTTCGCTATCATCAAAGAAGGCTTCAACACCAAGTGCATGAAAGTACCACCGAAGATTGTTATGGATTTGGGTGAAGAGTTTTGGAAGAAAGCATCGATTATTCTGGTATGCTCTTCTGGTGAGAAGTGGGAAGTTAAAATTTTGAAGAAAGAAAATGACATTTATCTGCGAAACTTTGGTTGGCAAAAGTTTCTGAAAGACAACTCAGTGGGACTTGAAGAGTTCTTGCTTTTCACATATATTGGAGAAAACCTATTCAATGTGGAAATTTATGGCAAGAATGGCTTAGAGAAACCATGCTTCAAGAAAAAACAAGAAGTTGTTGCAGCCCCAATTGTGGCCAAGAGAAAGAGGGGTAGACCAAGAAGAAATCCTGCAGATGTCAAGGAAGAAAAAGAAGAATCTGCTGCAACAGTTGTGGCTAATACAAAGATGGTGCAAAGAAAAAATCCCCCGAGGGTATGCGTTAGAAAAGAAAAGGCAGAGACTTTAGCAACAATTGTGACAAAGAAGGGTATACCAAGAAAAAATCCTGCTCCTCTTTCTGTTATTTTAGTAGACTGA 654 0.3777 MLFYIMKFIFAYTNGKKKQMDHEQQDKPSFFAIIKEGFNTKCMKVPPKIVMDLGEEFWKKASIILVCSSGEKWEVKILKKENDIYLRNFGWQKFLKDNSVGLEEFLLFTYIGENLFNVEIYGKNGLEKPCFKKKQEVVAAPIVAKRKRGRPRRNPADVKEEKEESAATVVANTKMVQRKNPPRVCVRKEKAETLATIVTKKGIPRKNPAPLSVILVD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02238 217 SMART B3_2 30 124 IPR003340 GO:0003677
Mepo2g02238 217 PANTHER B3 DOMAIN-CONTAINING 21 165 - -
Mepo2g02238 217 ProSiteProfiles B3 DNA-binding domain profile. 63 124 IPR003340 GO:0003677
Mepo2g02238 217 Pfam B3 DNA binding domain 37 121 IPR003340 GO:0003677
Mepo2g02238 217 Gene3D - 21 125 IPR015300 -
Mepo2g02238 217 SUPERFAMILY DNA-binding pseudobarrel domain 24 125 IPR015300 -
Mepo2g02238 217 CDD B3_DNA 28 121 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02238 Mepo-Chr2 32107244 32108646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02238 23 163 B3 DNA Binding Superfamily AT5G18090 29.371 6.95e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo2g02238 B3 2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02238 - - mtr:11414897 381.333