Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02237 ATGGATTATGATCACCAAGACAAACCATCTTTCTTCGCAATCATCAAAGAAGGCTTGAACATCAATCGCCTGAAAGTACCACCGGAGATTGTTACGGATTTGGGTGAAGAGTTGTGGAAGAATACGTTTATGATTCTGGTAGGTTCGTCTGGTGAGAAGTGGGAAGTGAGTATTTTGAAGAAAGGGAATGACATATATCTGCAAATTGGTTGGCAAAAATTTCTGATAGACAACAAAGTGATGCTTGAAGAGTTATTGGTTTTCACATATGATGGGGAGAACAAGTTCCAGGCGCAAATTTTTGGTAAGAATGGATTGGAGAGACCATGCTTCAAGAATGTACAAGAACAAGAAGAAATACAAGAAGAAGAAGTTACTGCAGCAGCTCCATTAACCGTGGCCAAGAGAAAGAGGGGTAGACCAAGAAAAGTTCCTTCTCCTGAGAGTGAGTGCTTTAAGAAAGAAAAAGCTGAAGTTGCAGCAAAAATTGTGGTTAAGAGAAATGATGGTAGAACAAGAAAAAGTCCTGCTGGTGAGAGAGTATGCTTCAGGAAAAAAGAAGAATTTGCAGCAACAATCATGTCTATGGGTAAGCCAAGAAAAAATCCTGTTCGTCAGAGAGTAAGTGTAAAGAAGGGTAGAACAAGAGAAAATCCTGCTGGTGAGAGGGTACGCATCATGAAAGAAGAAGCAAAATCTGCAGAAACAATGGTGGCTGAGAGAAAGAATGGTAGACCAAGAAAATATCCTGCTCCAATTGTTATTTTAGTTAACTGA 777 0.3964 MDYDHQDKPSFFAIIKEGLNINRLKVPPEIVTDLGEELWKNTFMILVGSSGEKWEVSILKKGNDIYLQIGWQKFLIDNKVMLEELLVFTYDGENKFQAQIFGKNGLERPCFKNVQEQEEIQEEEVTAAAPLTVAKRKRGRPRKVPSPESECFKKEKAEVAAKIVVKRNDGRTRKSPAGERVCFRKKEEFAATIMSMGKPRKNPVRQRVSVKKGRTRENPAGERVRIMKEEAKSAETMVAERKNGRPRKYPAPIVILVN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02237 258 Gene3D - 2 105 IPR015300 -
Mepo2g02237 258 PRINTS AT-hook-like domain signature 238 248 IPR017956 GO:0003677
Mepo2g02237 258 PRINTS AT-hook-like domain signature 135 145 IPR017956 GO:0003677
Mepo2g02237 258 PRINTS AT-hook-like domain signature 164 175 IPR017956 GO:0003677
Mepo2g02237 258 SUPERFAMILY DNA-binding pseudobarrel domain 5 105 IPR015300 -
Mepo2g02237 258 ProSiteProfiles B3 DNA-binding domain profile. 9 104 IPR003340 GO:0003677
Mepo2g02237 258 CDD B3_DNA 9 101 IPR003340 GO:0003677
Mepo2g02237 258 Pfam B3 DNA binding domain 19 101 IPR003340 GO:0003677
Mepo2g02237 258 SMART B3_2 11 104 IPR003340 GO:0003677
Mepo2g02237 258 MobiDBLite consensus disorder prediction 198 222 - -
Mepo2g02237 258 PANTHER B3 DOMAIN-CONTAINING 6 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02237 Mepo-Chr2 32102289 32104173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02237 9 123 REM Transcription Factor Family AT3G06220 29.565 4.31e-13 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo2g02237 B3 5.9e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02237 - - mtr:11412485 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02237 2 32102289 32104173 Mepo2g02237 2 32102289 32104173 ECH