Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02226 ATGGAAGACCAATATTCCTCAAAGGAGAGGGGGGGAATCAGCCTTTGGACACCATTTGATAGTGGAATGAAAAGTCCATTAACTTCAGATGACATGTTTAACAACATCTCTGAGCTTATGAACTTTGATAGCTATGCTGGTTGGTGCAATGGTTCATCATCAATAACTGATCAAACTTTAACTAATGATCTTTCATCATTTGCATATTCACCACATGATGGATTCAATTTAGCTGAACACATAAATGGTCCATTTTTTATGACAGAATTTGGTGGAAATTCCACTAGTTATGATGAAAATGTGCTATTACAAGAAATGGAAACTCAACTTGAGTTCTTAGATAATAATTCAAATGAAACAAATAATAATTTAGATTCACAACAAAATGGTTCATATGATATGTGCAATTACATAATATCCAAATCACCTAGTTGGTCACTTGATGAGAGAATGATGAGTGCTTTATCCTTCTTTAAGGAATCAGCTGGTGGAGGAATACTAGCACAAGTTTGGGCACCTATAAAGTATGGTGATGACTTCATCCTAACTACAAGTGATCAACCATATTTGTTAGATCAAAAGCTTGCAGGTTACCGCGAAGTGTCGAGGTCGTTTACGTTTTCTGCAGAAATGAAAATGGGATCTTGTTGTGCTGGACTTCCTGGTCGCGTGTTTAACTCGCATGTTCCTGAATGGACCTCTAATGTTGGTTACTATCATAAATCTGAGTACTTGAGATTAGATCATGCGATTAGTCACGATGTTCGGGGATCAATTGCTCTTCCTATATCTGATATGAACTCTGAAGTTTCATGTTGTGCTGTACTTGAACTTGTCACTACAAAGGAAAAGCCTAATTTTGACAAAGAATTAGAATTTGTTTCTCATGCACTTCAGCGTGTGAATCTAAGGACTATTATGCCTCCGCGACTTCTTCCTCAGTGTGTATCAAATAACAAAAGAGCTGCATTAACAGAGATAACCGATGTGTTAAGAGCTGTTTGTCATGCACATAGTTTACCTCTAGCACTGACATGGATTCCATGTTGTTATAGTGAAGGAAAAGGTGAAGAATCTGAGCGAATACGAATTAAAGAAGGCCATATAACAAGTTCTAATGAAAAATGTGTATTATGTATTGAAGAATCAGCTTGCTATATCAATGATAAAATGGTAGGAGGATTTGTTCATGCATGTTCTGAACATCATCTTGAGGAAGGACAAGGTATATCTGGAAAAGCTCTTCAATCAAATCATCCATTCTTCTATACCGATGTGAAGGCTTATGATGTTAGTGAATATCCGCTTGTTCATCATGCGCGAAAATATAACTTGAATGCTGCCGTTGCAATTAGGCTAAGGAGTACTTATACTAATGATGATGATTATGTGTTAGAATTCTTTCTTCCGATCAATATGTTAGGGAGTTCAGAACAACAACTTTTATTAGACAATTTGTCAGATACTATGAGAAGAATTTGTAAGAGTTTGAGGACAGTTTCAGAAGCTGAACTAAGTGGGATAGAAGGTTCTCAATATGAGTTTCAAAAGAAAAATGTCTCAGGTTTTTTTCCTATGTCAAGGGGGAACTCTCAGATAGCGTTTAGTAGCGGTGACCATGATTTATTCCAGATGTCATTCAACGAAACAAACCTAAAAAATAGTGGAAATCAAGCTGCTTACAGTCAGGCAACAAGTGGTTCAAGAAAGCAAGCTGAGAAAAAGAGGAGTGCAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGTAGTCTGAAAGATGCTGCAAAAAAAATTGGGGTTTGTCCAACAACTCTGAAGAGAATATGCAGACAACATGGGATTTCAAGATGGCCATCCCGCAAGATAAATAAAGTGAATCGTTCATTGAAGAAAATACAAACCGTGCTTGATTCTGTCCAAGGAGTTGAAGGAGTTCTGAAATTTGACCCTCACACTGGTGGATTTGTTGCAGGAGGTTCAATCATCCAACAAATTGGTACGCATAATAAAACTCGCATGTTCCCTGAGAAAACCTCGGTACCTAAGTTGGAGGATGAAGATGTTCTTGTTTCTAATTCATGTGAGGCGGAATTGGAGAAAGACAATGCTATTTCTGTTGACTGTATTGAAGATTCAACAACATGGCTTTGGACAAAGACTCAGGATTGTCCTAAACAAACCTCTAAAGATTATGTTCTTGAAAAAGAACAAGATCAATGTGGGTTGGACAATAGTAGTTTGCATGATATTGGCTCTCATAGTTCTTTTTCAATGATTGAACTTGGTATGGAAGAGGGAAAAGGAGCTGATGAACATAACAATCCTACTTCTTCAAGCATGACCGATTCATCGAATGCCTCTGGCTCAATGGTGAATGGAAGTTCATCAGGATCTCAAAGCATTGAGAATCAGAAGAACTCGAAAGTCAAATCAATTTGTGTCGATAGTGAATCGAAATTCGCTGTCAAAGCTAACTATAGAGGAGATACTATTCGTTTCAAGTTTGATCCATCTGTAGGTTGTTTTCAACTCTATGAAGAAGTTGCAAAAAGGTTTAAGTTACAAAATGGTTCTTTCCAACTCAAGTATCTTGATGATGAAGAGGAATGGGTGATGTTGGTGAATGACTCAGATTTGAAGGAATGTGTAGAAGTTTTGAGTGATATTGGTACACATTGTGTGAAGTTGCTCGTTCGCAATATACATGGCGGCAGTGACAGTTGA 2739 0.3742 MEDQYSSKERGGISLWTPFDSGMKSPLTSDDMFNNISELMNFDSYAGWCNGSSSITDQTLTNDLSSFAYSPHDGFNLAEHINGPFFMTEFGGNSTSYDENVLLQEMETQLEFLDNNSNETNNNLDSQQNGSYDMCNYIISKSPSWSLDERMMSALSFFKESAGGGILAQVWAPIKYGDDFILTTSDQPYLLDQKLAGYREVSRSFTFSAEMKMGSCCAGLPGRVFNSHVPEWTSNVGYYHKSEYLRLDHAISHDVRGSIALPISDMNSEVSCCAVLELVTTKEKPNFDKELEFVSHALQRVNLRTIMPPRLLPQCVSNNKRAALTEITDVLRAVCHAHSLPLALTWIPCCYSEGKGEESERIRIKEGHITSSNEKCVLCIEESACYINDKMVGGFVHACSEHHLEEGQGISGKALQSNHPFFYTDVKAYDVSEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYVLEFFLPINMLGSSEQQLLLDNLSDTMRRICKSLRTVSEAELSGIEGSQYEFQKKNVSGFFPMSRGNSQIAFSSGDHDLFQMSFNETNLKNSGNQAAYSQATSGSRKQAEKKRSAVEKNVSLSVLQQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGVLKFDPHTGGFVAGGSIIQQIGTHNKTRMFPEKTSVPKLEDEDVLVSNSCEAELEKDNAISVDCIEDSTTWLWTKTQDCPKQTSKDYVLEKEQDQCGLDNSSLHDIGSHSSFSMIELGMEEGKGADEHNNPTSSSMTDSSNASGSMVNGSSSGSQSIENQKNSKVKSICVDSESKFAVKANYRGDTIRFKFDPSVGCFQLYEEVAKRFKLQNGSFQLKYLDDEEEWVMLVNDSDLKECVEVLSDIGTHCVKLLVRNIHGGSDS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02226 912 CDD PB1_NLP 825 904 IPR034891 -
Mepo2g02226 912 MobiDBLite consensus disorder prediction 777 808 - -
Mepo2g02226 912 Coils Coil 103 123 - -
Mepo2g02226 912 Pfam RWP-RK domain 582 630 IPR003035 -
Mepo2g02226 912 MobiDBLite consensus disorder prediction 771 808 - -
Mepo2g02226 912 SUPERFAMILY CAD & PB1 domains 820 907 - -
Mepo2g02226 912 Gene3D - 820 903 - -
Mepo2g02226 912 Pfam PB1 domain 826 904 IPR000270 GO:0005515
Mepo2g02226 912 SMART PB1_new 824 906 IPR000270 GO:0005515
Mepo2g02226 912 ProSiteProfiles RWP-RK domain profile. 562 650 IPR003035 -
Mepo2g02226 912 PANTHER PROTEIN NLP8 92 906 IPR045012 GO:0003700
Mepo2g02226 912 ProSiteProfiles PB1 domain profile. 824 906 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02226 Mepo-Chr2 32031218 32037112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02226 1 906 NLP Transcription Factor Family AT2G43500 49.947 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo2g02226 PB1 9.6e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02226 - - aprc:113864503 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04056 6 52826186 52834117 Mepo2g02226 2 32031218 32037112 PCT