Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02217 ATGCCGCCACCGGCGAAGCCAACGCGGCCACAACATGAAACCAGCGGCAGAGACTCGGATGAATCTTCAACCCCATCGAACAACCTATGGGTTGCGAATCTTTCGCCGGACGTAACAGATTCCGATCTGATGGATCTGTTCGTTCAATACGGCGCTCTCGATAGCGTCACATCTTATTCCGGTCGCAGTTACGCTTTCGTGTACTTCAAACGCATTGATGATGCAAAAGCCGCTAAAAACGCTCTTCAGGGATTCAATTTTCGTGGCAATTCCTTGAAAATTGAGTTTGCTAGACCGGCAAAGACATGTAAACAGCTTTGGGTAGGTGGCATTAGCCCTGCTGTTACAAAGGAAGACTTGGAAGCTGACTTCCGCAAATTTGGTAAAGTTGACGATTTCAAGTTCTTCAGGGACAGAAATACTGCATGTGTTGAATTTTTCAATTTAGATGATGCTATTCAGGCAATGAAAATTATGAATGGAAAACGTATCGGTGGGGAAAATATCCGTGTTGACTTCCTCCGATCAAATTATGCAAAAAGAGATGATTATGGGCAATTTCAAGGCAAAAGCTTTGGGCCTTCTGATTCCTATGCTGGACAAAAAAGGCCACTGAATTCACAACCTCTAATGAGGAGGAAGGGTGACGGTCAACCCAGTAATATTTTGTGGATCGGTTATCCTCCCAATGTTCAGATCGATGAGCAAATGCTCCACAATGCCATGATCCTATTTGGTGAAATTGAGAGAATCAAGAGTTTTCCTTCAAGAAATTTTTCACTTGTTGAATTTAGAAGTGTTGATGAAGCCCGACGTGCAAAAGAGGGTCTTCAAGGGCGCCTTTTCAATGATCCTCACATAACAATTAATTATTCTAACGGTGACCAGGTACATGGCAAAGACTACCCTGGCTTTTATCCTGGAAGTAATGGGCCAAGACCTGATTTATTCCTAAATGAGAATCCATATCGACCTGCACAAATGGATTTATTTGGTCATAATCGTCCTATGATTCCGAATAGTTTTCCTGGACAATTGCCAAATGGTGGTATTGTTGGTCCAAACATACCAATGCGGCCTTTTGGTCCCAATGGTGGTCCTGAATCTGTTGTTTCTGGCCCTGAGTTTAACGAGAATAGTACACTACACAAGGGTCCAAACTGGAAACGGCCATCTCCTCCTGCACAAGGGTTGCTTTCTTCTCCTCTACCGGGTGCTAGGCTTCCTGCAAGATCATCCTCTGGTGCATGGGATGTTCTTGACATAAATCATATTCCAAGAGATTCTAAGCGGTCAAGGATAGATGGTGCATTACCTAATGATGATCCTTATGCAGGGAGGGGTATCCTTGGTTCAGCAAGCACAAGGATTACAGGTGGAGTACATGCTTCTGTCCAACCTGATCATATATGGCGCGGACTTATTGCAAAAGGAGGAACTCCTGTTTGTCGTGCTAGATGCGTCCCTGTAGGGAAAGGGATCGGGACAGAGCTTCCTGAAGTTGTTGATTGCTCAGCTAGGACGGGATTGAATACACTCGCAGCACACTATGCTGATGCAATAGACTTTGAGATTGTTTTCTTTTTGCCTGATAGTGAAGATGATTTTGGTTCATACACTGAATTCCTACGCTACCTTGGTGCAAAAAATCGTGCTGGTGTTGCCAAATTTGACAATACAACTTTATTCTTGGTACCTCCTTCTGATTTCCTGACAGATGTTCTGAAAGTCACCGGACCTGAACGTCTATATGGTGTCGTTCTCAAGTTTGCACCTGTACCAAGTGGTGTGCCGGTGCACCAATCATCACATTTACCAGTACCGTCAAATCAATATATGCAGCAGATGCCTCCTTCACAAGCTGAATATGATATGAACCCTGCAAAGGAGGAACAAGTTGTAGCAATGAATTACAACCGAATGTTGCACGAGGATTCTAAGCTTCCTGCTAAACAAGTATACCCACCTACAGCTGGGCCTCCTGCAGTTCAGCCTGCAGCTTCAGACTATGCTCTAAACACTGCTGCTTCTGGGTCTCAAGCTGGAGTTGCATTAACACCTGAGCTTATTGCAACTTTAGCTTCTTTTCTGCCCACAAATGCGCAGTCGCCCGCTATTGATGGTGCCAAGTCAGGTTCAGGCTCCTCAACTGTGAAGCTTCCATTTCCTCCTGTGGCACCTAATGATAAAAACCAATCTCAATTGTGGAAACAGGATCATCAAATTGCAGATCAATCCATTCATTCATCTCAGCAGTTTAGGAATATGTATAACAGTCACAATGCTCATTATCAGCCTTACCCGCCAGCATCAGCTCCTGGCCACACTGCTCAAGTGTTCTCTGGCAGTTCTCATATTCAAGACAATGCTGTTAGCCAGCAACAGCAAGGAGTTGTTTCATCTAGACTCGCGTCTAATTTTGTGACACCTACTCAAAGTGGACAGGTAGCTGCATCCCCCCATTTCAGTCATCAGTATCAGGCTGAAGTTCCCCCCAATACTCAGAAAGGCTTTGGTGTTGTGCCGGGAAGTGATGTCTCTGTTTTATACAATTCTCAGGCTTTCCAGCAACCTAATAATAACCCCCATCCTTTCCAGCAACCTAATAATAACCCCCAGCCTTTCCAGCAACATAATAATAACCCCCAGCCTTTCCAGCAACCCAATAATTCTACCACCTTATCTAGTCAAGTTAACAGTGCTAATCCTCAGCATCAGCCTGTCATGCAATATACTGCAGACCAAATAAACTCAAACCCTCCCGTTCAACAACATCCTGCCTTTGGAGTTGGTCAAGGCCCCCCAGAATTGGAGGCTGATAAGAACCAGAGATACCAGTCAACATTGCAGTTTGCTGCCAATCTTCTACTACAAATACAGCAGCAGCAAACACAAGGAGGACATGGGCCAGGAGTTCAACAATAA 2925 0.4468 MPPPAKPTRPQHETSGRDSDESSTPSNNLWVANLSPDVTDSDLMDLFVQYGALDSVTSYSGRSYAFVYFKRIDDAKAAKNALQGFNFRGNSLKIEFARPAKTCKQLWVGGISPAVTKEDLEADFRKFGKVDDFKFFRDRNTACVEFFNLDDAIQAMKIMNGKRIGGENIRVDFLRSNYAKRDDYGQFQGKSFGPSDSYAGQKRPLNSQPLMRRKGDGQPSNILWIGYPPNVQIDEQMLHNAMILFGEIERIKSFPSRNFSLVEFRSVDEARRAKEGLQGRLFNDPHITINYSNGDQVHGKDYPGFYPGSNGPRPDLFLNENPYRPAQMDLFGHNRPMIPNSFPGQLPNGGIVGPNIPMRPFGPNGGPESVVSGPEFNENSTLHKGPNWKRPSPPAQGLLSSPLPGARLPARSSSGAWDVLDINHIPRDSKRSRIDGALPNDDPYAGRGILGSASTRITGGVHASVQPDHIWRGLIAKGGTPVCRARCVPVGKGIGTELPEVVDCSARTGLNTLAAHYADAIDFEIVFFLPDSEDDFGSYTEFLRYLGAKNRAGVAKFDNTTLFLVPPSDFLTDVLKVTGPERLYGVVLKFAPVPSGVPVHQSSHLPVPSNQYMQQMPPSQAEYDMNPAKEEQVVAMNYNRMLHEDSKLPAKQVYPPTAGPPAVQPAASDYALNTAASGSQAGVALTPELIATLASFLPTNAQSPAIDGAKSGSGSSTVKLPFPPVAPNDKNQSQLWKQDHQIADQSIHSSQQFRNMYNSHNAHYQPYPPASAPGHTAQVFSGSSHIQDNAVSQQQQGVVSSRLASNFVTPTQSGQVAASPHFSHQYQAEVPPNTQKGFGVVPGSDVSVLYNSQAFQQPNNNPHPFQQPNNNPQPFQQHNNNPQPFQQPNNSTTLSSQVNSANPQHQPVMQYTADQINSNPPVQQHPAFGVGQGPPELEADKNQRYQSTLQFAANLLLQIQQQQTQGGHGPGVQQ 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02217 974 Gene3D - 210 301 IPR012677 -
Mepo2g02217 974 MobiDBLite consensus disorder prediction 916 941 - -
Mepo2g02217 974 MobiDBLite consensus disorder prediction 855 904 - -
Mepo2g02217 974 MobiDBLite consensus disorder prediction 190 204 - -
Mepo2g02217 974 Gene3D - 6 101 IPR012677 -
Mepo2g02217 974 Gene3D - 102 183 IPR012677 -
Mepo2g02217 974 MobiDBLite consensus disorder prediction 359 412 - -
Mepo2g02217 974 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 221 294 IPR000504 GO:0003723
Mepo2g02217 974 CDD RRM_SF 29 95 - -
Mepo2g02217 974 MobiDBLite consensus disorder prediction 1 27 - -
Mepo2g02217 974 SUPERFAMILY RNA-binding domain, RBD 8 101 IPR035979 GO:0003676
Mepo2g02217 974 FunFam Flowering time control protein FPA 19 101 - -
Mepo2g02217 974 MobiDBLite consensus disorder prediction 707 741 - -
Mepo2g02217 974 MobiDBLite consensus disorder prediction 190 214 - -
Mepo2g02217 974 SMART rrm1_1 222 290 IPR000504 GO:0003723
Mepo2g02217 974 SMART rrm1_1 28 95 IPR000504 GO:0003723
Mepo2g02217 974 SMART rrm1_1 105 172 IPR000504 GO:0003723
Mepo2g02217 974 PANTHER RNA RECOGNITION MOTIF-CONTAINING 23 97 - -
Mepo2g02217 974 MobiDBLite consensus disorder prediction 727 741 - -
Mepo2g02217 974 Pfam SPOC domain 467 581 IPR012921 -
Mepo2g02217 974 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 93 IPR000504 GO:0003723
Mepo2g02217 974 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 106 170 IPR000504 GO:0003723
Mepo2g02217 974 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 233 284 IPR000504 GO:0003723
Mepo2g02217 974 CDD RRM_SF 106 172 - -
Mepo2g02217 974 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 99 IPR000504 GO:0003723
Mepo2g02217 974 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 104 176 IPR000504 GO:0003723
Mepo2g02217 974 SUPERFAMILY RNA-binding domain, RBD 105 294 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02217 Mepo-Chr2 31954798 31965283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02217 1 347 Eukaryotic Initiation Factors Gene Family AT4G34110 21.574 1.27e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02217 - - mtr:11412967 1776.53