Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02201 ATGAGAAAACCCAAATCAAAGAAGTTTCGTAAGAAACAACTGAGAAAACCCAAATCAAAGGAGTTTCGTAAGAAACAACGCTTCTCAGAAGAACTAGACGAAATCAACCTCTTGAATTCATGGATTCAATCTCAAAAACCAGAATCCGGTTCAAACCCAATGTCTCTTCCACCTCTCCCCAACAACTCCCCCGTCGGCCGCCTCGCCGACGGCACGTTCTCTCGCTACGCCGGCGTGGCCCGGTTTCAACAGTTACCGATATCGAAGAATATCAAAAAGGCATTGATATCGAAGAAAACCCAAGGCAAATTGCGTTCGAAATTCGTTTCCATGACCGACATTCAACGAGCTTCTCTTCCTCATGCGCTTTGTGGTCGTGATGTTCTTGGTGCCGCCAAAACTGGTTCTGGAAAAACACTTGCTTTCATTATTCCTATTTTTGCCGTGTTGGAGGCTATTGGGTGTATCCATGGTTTTAGTGCTGGCCTCCTCATTGGTGGTCAGGATGTTGCTGCAGAGAAAGAACGTGTCAACAAGCTAAATGTATTGATCTGCACACCCGGTCGCCTTCTACAACACATGGATGAAACTCCCAATTTTGATTGTTCAAAGATGCAGGTTTTGGTACTAGATGAGGCTGACCGTATTCTTGATAGTGGATTCAAGAAGGAACTAAATGCAATCATCTCACAATTACCAAAGCGTAGACAAACCATGCTTTTCTCGGCAACTCAAACAAAGTCGGTTCAAGATCTTGCAAGACTAAGTTTGAAGGACCCAGAGTATATAAGTGTGCACGAAGAGTCTGTGACTGCAACTCCTACTCTTTTGAAGCAAATGGTGATGATCGTTCCCCTGGATCAAAAGTTAGATATGCTATGGGATTTCATAAAGACACGTCTAAAGTCAAAAACACTTGTCTTTCTATCAAGCTGTAAACAGGTAAAATTTGTGTTTGAGGCATTTAAGAAACTTCACCCTGGCATACCGTTGAAGTGCCTTCATGGGAGGATGAAACAGGAAAAAAGAATGGCAATATATTCCAAGTTCTGTGAGAAGTGCTCAATTCTCTTCGCAACTGATGTGGCTGCAAGAGGCCTTGATTTTAATAGGGCAGTCGACTGGGTTGTTCAGGTAGATTGTCCCGAGAATGTAGCATCTTACATCCATCGAGTTGGCCGTACTGCTCGCTATAAATCTCTTGGAAAGTCAGTTTTATTTCTATTGCCTTCAGAAACTAAGATGCTTGAAAAGTTAGAAGCAGGAAAGGTTCCAGTTCATTCTCCTCCGAAGCCAAGGAAAGAACTGCTGCAACCGGTGTCCAGTTTGCTTGCATCTTTACTGGTCAAGTACCCAGAACTTCAGCAGCAGGCCCAAAGGGCATTTGTCACATACTTGAGATCCATCCACCTCCAAAAAGATAAAGAGATCTTTGACGTTTTGAAACTTCCTATTGATGAGTATTCAGCATCATTAGGTCTGCCAATGACCCCCAAAATCCGTTTTCTAAAACAGAAAATTAAATCTAAAGCTGTGGCAACAAAATCAATTTTAGTTGAACCTGAGGTTCCAAAAAAGGAAAATGTCTTGGAAGGTTCAAGAGAAAAGATAGACACAGTTGTTTTCAAAGATGAGGAAATTGAAAACGATCTTCTTCATGTGGCTGATACCTCAAATGAAGGCGACGGGAAGTCAGCTGAAATTGGAGAGTTAATGCCAGCAACTCGTTTATTAAAGAAAAAAAAGCTCAAGATTAACATGCATAGACCACTGGGGAGTCGGGTTGTATTCGACGATGAAGGCAACACACTTCCTCCACTAGCCAGGATTGCTGACCCACAAAGTGGCAATGGAACATTGATTGATCCAGAACAAAAAGCTGAATACTATAAAAGGATGCGAGAGGATTTGAAGAAGGCAGACAAGGAAGACAAACTTGTAGAGCGTCAGCGACTTAGGGATAAAAAATTTAAGCAGAAAATGAAATGGAAGGCTGGTAATGAGGAAGAAGAGGACAACCAAGATAACACCTCTGGGTCAGGAGATGAAACGGTAAATAGACGTCATAAAAAGAGTAAAATATACTTTGATAGTGACAGTGATGAGGGTGAAAGAAAAGAAGCTTCAAGGAAACAAACGGAAGATCAAGAAGAGTTGGCTTTGAGGTTGTTACAATCCATGCACTGA 2187 0.4207 MRKPKSKKFRKKQLRKPKSKEFRKKQRFSEELDEINLLNSWIQSQKPESGSNPMSLPPLPNNSPVGRLADGTFSRYAGVARFQQLPISKNIKKALISKKTQGKLRSKFVSMTDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPIFAVLEAIGCIHGFSAGLLIGGQDVAAEKERVNKLNVLICTPGRLLQHMDETPNFDCSKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVHEESVTATPTLLKQMVMIVPLDQKLDMLWDFIKTRLKSKTLVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQEKRMAIYSKFCEKCSILFATDVAARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSVLFLLPSETKMLEKLEAGKVPVHSPPKPRKELLQPVSSLLASLLVKYPELQQQAQRAFVTYLRSIHLQKDKEIFDVLKLPIDEYSASLGLPMTPKIRFLKQKIKSKAVATKSILVEPEVPKKENVLEGSREKIDTVVFKDEEIENDLLHVADTSNEGDGKSAEIGELMPATRLLKKKKLKINMHRPLGSRVVFDDEGNTLPPLARIADPQSGNGTLIDPEQKAEYYKRMREDLKKADKEDKLVERQRLRDKKFKQKMKWKAGNEEEEDNQDNTSGSGDETVNRRHKKSKIYFDSDSDEGERKEASRKQTEDQEELALRLLQSMH 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02201 728 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 119 263 IPR014001 -
Mepo2g02201 728 CDD SF2_C_DEAD 277 408 - -
Mepo2g02201 728 MobiDBLite consensus disorder prediction 1 22 - -
Mepo2g02201 728 MobiDBLite consensus disorder prediction 1 27 - -
Mepo2g02201 728 Pfam DEAD/DEAH box helicase 161 252 IPR011545 GO:0003676|GO:0005524
Mepo2g02201 728 Gene3D - 72 150 IPR027417 -
Mepo2g02201 728 Pfam Helicase conserved C-terminal domain 289 398 IPR001650 -
Mepo2g02201 728 MobiDBLite consensus disorder prediction 682 718 - -
Mepo2g02201 728 Pfam Domain of unknown function (DUF4217) 443 500 IPR025313 -
Mepo2g02201 728 Coils Coil 630 650 - -
Mepo2g02201 728 PANTHER RNA HELICASE 43 579 - -
Mepo2g02201 728 SMART DUF4217_3 439 502 IPR025313 -
Mepo2g02201 728 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 289 437 IPR001650 -
Mepo2g02201 728 Pfam DEAD/DEAH box helicase 112 150 IPR011545 GO:0003676|GO:0005524
Mepo2g02201 728 Gene3D - 274 520 IPR027417 -
Mepo2g02201 728 MobiDBLite consensus disorder prediction 656 728 - -
Mepo2g02201 728 SMART helicmild6 316 399 IPR001650 -
Mepo2g02201 728 Gene3D - 151 269 IPR027417 -
Mepo2g02201 728 SMART ultradead3 107 280 IPR014001 -
Mepo2g02201 728 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 209 217 IPR000629 -
Mepo2g02201 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 418 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02201 Mepo-Chr2 31766397 31771884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02201 115 420 Eukaryotic Initiation Factors Gene Family AT3G19760 28.060 3.44e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02201 K14776 - gmx:100792106 1086.25