Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02193 ATGGGAAGTTGTGTATCAACGCAAGGTAAACATGGCGGGCGAAAGAAATCAAAGGACCATCACATCAACACCAAACACAAAATAAATGATCAAATCCATGAGCCTAACACACCAACAACGCGTAGATCAAGCGTGGCAGGGCGTAGATCAAGCGTGACATCACGCCAACTTAACGTTGTAACGAATCCAAGTCCAGGAAACATATTTGATAAATATGAATTAGGAAAAGAGCTTGGGAGAGGTGAATTCGGCGTGACACATCGTTGCGTGGAACTTAAAACGGGCGAGGCGTTTGCGTGTAAGAAGATAGCGAAGACGAAGCTGAGGACCGAGATTGATATTCAAGATGTGAGGAGAGAGGTTCAGATTATGAGGCATTTGCCTGAACATCCTAATATTGTGGCATTTAGAGAAGCTTATGAAGATAGAGATGCTGTTTATCTTGTTATGGAATTGTGTGAAGGTGGTGAACTTTTTGATAGGATTGTTGCTAAAGGTCATTATACAGAAAGAGCTGCTGCTAATGTTGCCAAAACCATTCTTGAAGTTTGCAAGGTGTGCCATGAACATGGTGTGATACATAGGGACTTAAAACCTGAAAATTTCTTATTTGCAGATGGAAGTGAGGCAGCTTCCCTTAAGGCAATTGATTTTGGCCTTTCCACTTTCTATGTAAACGGCGATAGATTCAATGAAATCGTCGGAAGTCCATATTACATGGCTCCTGAGGTTTTAAGACGTAACTATGGACAAGAAATCGATATCTGGAGCACAGGAGTTATTCTTTATATTTTGCTTTGTGGAGTTCCGCCCTTCTGGGCAGAAACTGAAGAAGCCATTGCACAAGCGATAATCCGAGGTAATGTAGATTTCACAAGAGATCCTTGGCCTAAAGTTTCAGAGGAAGCAAAATACCTTGTGAAGCGCATGCTTGATCCGAATCCATTCTCAAGAATCACAGTTCAAGAAGTTCTTGATCATTCCTGGATACAAAATAGGGAGAATGGTAAAAATGTATCTCTTGGAGACCAAGTTAGGTCGAGGATCAAACAATTCTCCTTGATGAACAGATTCAAAAAGAAAGTTCTTAGAGTGGTGGCTGATAACTTGCCGGATGAACAAATTGACGGGTTTAGGAAAATGTTTGATATGATGGACAAAGACAAAAATGGACACTTAACATTTGAAGAGCTCAAAGATGGGTTTGCAGAGATCGGAAACGTTATTCCTGATCCTGATCTTCAAATGTTAATGGATGCTGCAGATTTTGATGGAAATGGCACCTTGAATTGTGAAGAGTTCATTACAATGAGTGTTCACATGAGAAGACTTGGAAATGATGAGCATCTCACAGAAGCATTCAATTTCTTTGACAAAAATAAGAGTGGATATGTTGAGTTTGATGAGTTGAAAGATGCCTTATCAGATGATGGTTCGACCGATGACCAAGTGATCAGAGACATTCTCAACGATGTCGACTTGGATAAGGACGGTCGAGTAAGTTTTGAGGAATTTAAGGCAATGATGAAGACAGGAGGAGATTGGAAAATGGCATCTAGACAATATTCAAAAGCATTTCTAAATGCATTAAGCTTCAGAATGTTTAAAGACAAATCTACGGGAGTAACAACTAACTAA 1638 0.4005 MGSCVSTQGKHGGRKKSKDHHINTKHKINDQIHEPNTPTTRRSSVAGRRSSVTSRQLNVVTNPSPGNIFDKYELGKELGRGEFGVTHRCVELKTGEAFACKKIAKTKLRTEIDIQDVRREVQIMRHLPEHPNIVAFREAYEDRDAVYLVMELCEGGELFDRIVAKGHYTERAAANVAKTILEVCKVCHEHGVIHRDLKPENFLFADGSEAASLKAIDFGLSTFYVNGDRFNEIVGSPYYMAPEVLRRNYGQEIDIWSTGVILYILLCGVPPFWAETEEAIAQAIIRGNVDFTRDPWPKVSEEAKYLVKRMLDPNPFSRITVQEVLDHSWIQNRENGKNVSLGDQVRSRIKQFSLMNRFKKKVLRVVADNLPDEQIDGFRKMFDMMDKDKNGHLTFEELKDGFAEIGNVIPDPDLQMLMDAADFDGNGTLNCEEFITMSVHMRRLGNDEHLTEAFNFFDKNKSGYVEFDELKDALSDDGSTDDQVIRDILNDVDLDKDGRVSFEEFKAMMKTGGDWKMASRQYSKAFLNALSFRMFKDKSTGVTTN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02193 545 CDD STKc_CAMK 71 329 - -
Mepo2g02193 545 SUPERFAMILY EF-hand 369 509 IPR011992 -
Mepo2g02193 545 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Mepo2g02193 545 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Mepo2g02193 545 CDD EFh 378 437 IPR002048 GO:0005509
Mepo2g02193 545 Gene3D - 339 512 - -
Mepo2g02193 545 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g02193 545 CDD EFh 449 510 IPR002048 GO:0005509
Mepo2g02193 545 PANTHER SERINE/THREONINE-PROTEIN KINASE 65 502 - -
Mepo2g02193 545 SUPERFAMILY Protein kinase-like (PK-like) 53 335 IPR011009 -
Mepo2g02193 545 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Mepo2g02193 545 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g02193 545 Gene3D Transferase(Phosphotransferase) domain 1 158 338 - -
Mepo2g02193 545 Pfam EF-hand domain pair 379 437 IPR002048 GO:0005509
Mepo2g02193 545 Pfam EF-hand domain pair 448 510 IPR002048 GO:0005509
Mepo2g02193 545 SMART efh_1 449 477 IPR002048 GO:0005509
Mepo2g02193 545 SMART efh_1 377 405 IPR002048 GO:0005509
Mepo2g02193 545 SMART efh_1 413 441 IPR002048 GO:0005509
Mepo2g02193 545 SMART efh_1 484 512 IPR002048 GO:0005509
Mepo2g02193 545 MobiDBLite consensus disorder prediction 1 54 - -
Mepo2g02193 545 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Mepo2g02193 545 FunFam calcium-dependent protein kinase 13 158 338 - -
Mepo2g02193 545 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Mepo2g02193 545 MobiDBLite consensus disorder prediction 33 54 - -
Mepo2g02193 545 Pfam Protein kinase domain 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g02193 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mepo2g02193 545 ProSiteProfiles EF-hand calcium-binding domain profile. 480 515 IPR002048 GO:0005509
Mepo2g02193 545 FunFam Calcium-dependent protein kinase 1 74 157 - -
Mepo2g02193 545 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Mepo2g02193 545 ProSiteProfiles EF-hand calcium-binding domain profile. 445 479 IPR002048 GO:0005509
Mepo2g02193 545 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Mepo2g02193 545 FunFam Calcium-dependent protein kinase 7 339 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02193 Mepo-Chr2 31691777 31695283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02193 1 537 EF-hand Containing Proteins AT2G31500 66.727 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo2g02193 Pkinase 3.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02193 K13412 - gmx:100818929 872.078